Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
PDX1P52945 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
PDX1P52945 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PDX1P52945 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
PDX1P52945 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PDX1P52945 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC14.7□□□□□ -0.06
PDX1P52945 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
PDX1P52945 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PDX1P52945 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
PDX1P52945 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
PDX1P52945 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
PDX1P52945 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
PDX1P52945 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PDX1P52945 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PDX1P52945 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC14.7□□□□□ -0.06
PDX1P52945 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PDX1P52945 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
PDX1P52945 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
PDX1P52945 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC14.7□□□□□ -0.06
PDX1P52945 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC14.7□□□□□ -0.06
PDX1P52945 HLA-DPB2-205ENST00000435074 1188 ntBASIC14.7□□□□□ -0.06
PDX1P52945 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC14.7□□□□□ -0.06
PDX1P52945 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
PDX1P52945 APOA2-204ENST00000464492 530 ntTSL 3 BASIC14.7□□□□□ -0.06
PDX1P52945 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
PDX1P52945 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC14.7□□□□□ -0.06
PDX1P52945 PARP8-218ENST00000513738 596 ntTSL 4 BASIC14.7□□□□□ -0.06
PDX1P52945 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PDX1P52945 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC14.7□□□□□ -0.06
PDX1P52945 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC14.7□□□□□ -0.06
PDX1P52945 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
PDX1P52945 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
PDX1P52945 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
PDX1P52945 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC14.7□□□□□ -0.06
PDX1P52945 AP002414.2-201ENST00000591780 3365 ntBASIC14.7□□□□□ -0.06
PDX1P52945 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
PDX1P52945 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PDX1P52945 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
PDX1P52945 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC14.7□□□□□ -0.06
PDX1P52945 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
PDX1P52945 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
PDX1P52945 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PDX1P52945 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
PDX1P52945 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PDX1P52945 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC14.7□□□□□ -0.06
PDX1P52945 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PDX1P52945 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PDX1P52945 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
PDX1P52945 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
PDX1P52945 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC14.7□□□□□ -0.06
PDX1P52945 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
PDX1P52945 AMT-224ENST00000635808 1610 ntTSL 5 BASIC14.7□□□□□ -0.06
PDX1P52945 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
PDX1P52945 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC14.7□□□□□ -0.06
PDX1P52945 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
PDX1P52945 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
PDX1P52945 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC14.69□□□□□ -0.06
PDX1P52945 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PDX1P52945 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
PDX1P52945 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PDX1P52945 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
PDX1P52945 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PDX1P52945 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PDX1P52945 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PDX1P52945 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PDX1P52945 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC14.69□□□□□ -0.06
PDX1P52945 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
PDX1P52945 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PDX1P52945 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PDX1P52945 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PDX1P52945 SNX21-203ENST00000372541 771 ntTSL 2 BASIC14.69□□□□□ -0.06
PDX1P52945 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC14.69□□□□□ -0.06
PDX1P52945 B9D1-203ENST00000395615 805 ntTSL 3 BASIC14.69□□□□□ -0.06
PDX1P52945 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC14.69□□□□□ -0.06
PDX1P52945 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC14.69□□□□□ -0.06
PDX1P52945 AL139094.1-201ENST00000405549 1188 ntBASIC14.69□□□□□ -0.06
PDX1P52945 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC14.69□□□□□ -0.06
PDX1P52945 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC14.69□□□□□ -0.06
PDX1P52945 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC14.69□□□□□ -0.06
PDX1P52945 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC14.69□□□□□ -0.06
PDX1P52945 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
PDX1P52945 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC14.69□□□□□ -0.06
PDX1P52945 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC14.69□□□□□ -0.06
PDX1P52945 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC14.69□□□□□ -0.06
PDX1P52945 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC14.69□□□□□ -0.06
PDX1P52945 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
PDX1P52945 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PDX1P52945 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC14.69□□□□□ -0.06
PDX1P52945 AC106872.11-201ENST00000605838 421 ntBASIC14.69□□□□□ -0.06
PDX1P52945 ENPP7P14-201ENST00000621765 1040 ntBASIC14.69□□□□□ -0.06
PDX1P52945 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC14.69□□□□□ -0.06
PDX1P52945 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC14.69□□□□□ -0.06
PDX1P52945 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC14.69□□□□□ -0.06
PDX1P52945 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PDX1P52945 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
PDX1P52945 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
PDX1P52945 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC14.69□□□□□ -0.06
PDX1P52945 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
PDX1P52945 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC14.69□□□□□ -0.06
PDX1P52945 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms