Protein–RNA interactions for Protein: P52788

SMS, Spermine synthase, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMSP52788 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
SMSP52788 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.12
SMSP52788 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SMSP52788 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC14.27□□□□□ -0.12
SMSP52788 COCH-203ENST00000460581 2688 ntTSL 2 BASIC14.27□□□□□ -0.12
SMSP52788 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SMSP52788 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SMSP52788 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
SMSP52788 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC14.27□□□□□ -0.13
SMSP52788 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC14.27□□□□□ -0.13
SMSP52788 FAM8A2P-201ENST00000528813 1142 ntBASIC14.27□□□□□ -0.13
SMSP52788 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC14.27□□□□□ -0.13
SMSP52788 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC14.27□□□□□ -0.13
SMSP52788 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
SMSP52788 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC14.27□□□□□ -0.13
SMSP52788 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.13
SMSP52788 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SMSP52788 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SMSP52788 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
SMSP52788 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
SMSP52788 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.13
SMSP52788 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SMSP52788 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
SMSP52788 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
SMSP52788 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
SMSP52788 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC14.27□□□□□ -0.13
SMSP52788 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
SMSP52788 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SMSP52788 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC14.27□□□□□ -0.13
SMSP52788 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SMSP52788 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
SMSP52788 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SMSP52788 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC14.27□□□□□ -0.13
SMSP52788 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC14.27□□□□□ -0.13
SMSP52788 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC14.27□□□□□ -0.13
SMSP52788 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC14.26□□□□□ -0.13
SMSP52788 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC14.26□□□□□ -0.13
SMSP52788 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
SMSP52788 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SMSP52788 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SMSP52788 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
SMSP52788 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
SMSP52788 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
SMSP52788 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC14.26□□□□□ -0.13
SMSP52788 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SMSP52788 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC14.26□□□□□ -0.13
SMSP52788 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
SMSP52788 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SMSP52788 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SMSP52788 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
SMSP52788 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SMSP52788 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SMSP52788 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC14.26□□□□□ -0.13
SMSP52788 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SMSP52788 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SMSP52788 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC14.26□□□□□ -0.13
SMSP52788 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC14.26□□□□□ -0.13
SMSP52788 ELP6-209ENST00000446787 894 ntTSL 3 BASIC14.26□□□□□ -0.13
SMSP52788 AL589987.1-201ENST00000453380 819 ntBASIC14.26□□□□□ -0.13
SMSP52788 RHOA-206ENST00000454011 889 ntTSL 2 BASIC14.26□□□□□ -0.13
SMSP52788 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
SMSP52788 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC14.26□□□□□ -0.13
SMSP52788 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
SMSP52788 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
SMSP52788 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SMSP52788 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
SMSP52788 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SMSP52788 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
SMSP52788 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SMSP52788 GRK6P1-201ENST00000400595 1711 ntBASIC14.26□□□□□ -0.13
SMSP52788 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
SMSP52788 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SMSP52788 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
SMSP52788 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
SMSP52788 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
SMSP52788 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC14.25□□□□□ -0.13
SMSP52788 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
SMSP52788 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SMSP52788 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
SMSP52788 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SMSP52788 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC14.25□□□□□ -0.13
SMSP52788 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC14.25□□□□□ -0.13
SMSP52788 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC14.25□□□□□ -0.13
SMSP52788 POLL-206ENST00000370172 2308 ntTSL 2 BASIC14.25□□□□□ -0.13
SMSP52788 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC14.25□□□□□ -0.13
SMSP52788 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SMSP52788 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
SMSP52788 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC14.25□□□□□ -0.13
SMSP52788 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SMSP52788 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SMSP52788 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
SMSP52788 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SMSP52788 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SMSP52788 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SMSP52788 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SMSP52788 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SMSP52788 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
SMSP52788 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC14.25□□□□□ -0.13
SMSP52788 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC14.25□□□□□ -0.13
SMSP52788 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 89.9 ms