Protein–RNA interactions for Protein: P50458

LHX2, LIM/homeobox protein Lhx2, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX2P50458 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
LHX2P50458 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
LHX2P50458 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC13.46□□□□□ -0.26
LHX2P50458 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
LHX2P50458 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
LHX2P50458 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LHX2P50458 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
LHX2P50458 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
LHX2P50458 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
LHX2P50458 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
LHX2P50458 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC13.45□□□□□ -0.26
LHX2P50458 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
LHX2P50458 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC13.45□□□□□ -0.26
LHX2P50458 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC13.45□□□□□ -0.26
LHX2P50458 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC13.45□□□□□ -0.26
LHX2P50458 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC13.45□□□□□ -0.26
LHX2P50458 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC13.45□□□□□ -0.26
LHX2P50458 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC13.45□□□□□ -0.26
LHX2P50458 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC13.45□□□□□ -0.26
LHX2P50458 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
LHX2P50458 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
LHX2P50458 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LHX2P50458 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
LHX2P50458 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
LHX2P50458 AGAP7P-201ENST00000582299 2062 ntBASIC13.45□□□□□ -0.26
LHX2P50458 AC009093.2-202ENST00000620513 2079 ntBASIC13.45□□□□□ -0.26
LHX2P50458 AGAP14-201ENST00000624701 2060 ntBASIC13.45□□□□□ -0.26
LHX2P50458 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC13.45□□□□□ -0.26
LHX2P50458 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC13.45□□□□□ -0.26
LHX2P50458 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LHX2P50458 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LHX2P50458 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
LHX2P50458 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
LHX2P50458 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LHX2P50458 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
LHX2P50458 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC13.45□□□□□ -0.26
LHX2P50458 TISP43-201ENST00000409793 538 ntTSL 4 BASIC13.45□□□□□ -0.26
LHX2P50458 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
LHX2P50458 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC13.45□□□□□ -0.26
LHX2P50458 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
LHX2P50458 HIST2H2BB-201ENST00000449108 381 ntBASIC13.45□□□□□ -0.26
LHX2P50458 AL591846.1-201ENST00000451736 433 ntBASIC13.45□□□□□ -0.26
LHX2P50458 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
LHX2P50458 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC13.45□□□□□ -0.26
LHX2P50458 AGER-214ENST00000538695 487 ntTSL 2 BASIC13.45□□□□□ -0.26
LHX2P50458 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
LHX2P50458 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC13.45□□□□□ -0.26
LHX2P50458 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC13.45□□□□□ -0.26
LHX2P50458 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC13.45□□□□□ -0.26
LHX2P50458 MIR4683-201ENST00000579659 81 ntBASIC13.45□□□□□ -0.26
LHX2P50458 PRKN-211ENST00000615065 261 ntTSL 5 BASIC13.45□□□□□ -0.26
LHX2P50458 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
LHX2P50458 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
LHX2P50458 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
LHX2P50458 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
LHX2P50458 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
LHX2P50458 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LHX2P50458 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
LHX2P50458 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
LHX2P50458 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
LHX2P50458 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC13.45□□□□□ -0.26
LHX2P50458 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC13.45□□□□□ -0.26
LHX2P50458 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
LHX2P50458 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC13.44□□□□□ -0.26
LHX2P50458 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LHX2P50458 AC068587.6-202ENST00000641839 5619 ntBASIC13.44□□□□□ -0.26
LHX2P50458 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LHX2P50458 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
LHX2P50458 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LHX2P50458 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
LHX2P50458 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC13.44□□□□□ -0.26
LHX2P50458 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LHX2P50458 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LHX2P50458 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LHX2P50458 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
LHX2P50458 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC13.44□□□□□ -0.26
LHX2P50458 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
LHX2P50458 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
LHX2P50458 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC13.44□□□□□ -0.26
LHX2P50458 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
LHX2P50458 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
LHX2P50458 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
LHX2P50458 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
LHX2P50458 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC13.44□□□□□ -0.26
LHX2P50458 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
LHX2P50458 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC13.44□□□□□ -0.26
LHX2P50458 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC13.44□□□□□ -0.26
LHX2P50458 CDC23-208ENST00000505120 455 ntTSL 3 BASIC13.44□□□□□ -0.26
LHX2P50458 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC13.44□□□□□ -0.26
LHX2P50458 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC13.44□□□□□ -0.26
LHX2P50458 RNF41-210ENST00000552244 716 ntTSL 3 BASIC13.44□□□□□ -0.26
LHX2P50458 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC13.44□□□□□ -0.26
LHX2P50458 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC13.44□□□□□ -0.26
LHX2P50458 MIR4525-201ENST00000580000 75 ntBASIC13.44□□□□□ -0.26
LHX2P50458 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
LHX2P50458 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC13.44□□□□□ -0.26
LHX2P50458 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC13.44□□□□□ -0.26
LHX2P50458 ABBA01031663.1-201ENST00000635630 790 ntBASIC13.44□□□□□ -0.26
LHX2P50458 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
LHX2P50458 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 90.1 ms