Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
CDC34P49427 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
CDC34P49427 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC12.03□□□□□ -0.48
CDC34P49427 MBTD1-204ENST00000586178 5382 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
CDC34P49427 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC12.03□□□□□ -0.48
CDC34P49427 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
CDC34P49427 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC12.03□□□□□ -0.48
CDC34P49427 VCP-201ENST00000358901 4370 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CDC34P49427 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CDC34P49427 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC12.03□□□□□ -0.48
CDC34P49427 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC12.03□□□□□ -0.48
CDC34P49427 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
CDC34P49427 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC12.03□□□□□ -0.48
CDC34P49427 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC12.03□□□□□ -0.48
CDC34P49427 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
CDC34P49427 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC12.03□□□□□ -0.48
CDC34P49427 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC12.03□□□□□ -0.48
CDC34P49427 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC12.03□□□□□ -0.48
CDC34P49427 CMC2-214ENST00000565925 640 ntTSL 5 BASIC12.03□□□□□ -0.48
CDC34P49427 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
CDC34P49427 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
CDC34P49427 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
CDC34P49427 AC092117.1-201ENST00000621230 3250 ntBASIC12.03□□□□□ -0.48
CDC34P49427 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CDC34P49427 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
CDC34P49427 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC12.03□□□□□ -0.48
CDC34P49427 KSR1-204ENST00000398988 7237 ntAPPRIS P2 TSL 5 BASIC12.03□□□□□ -0.48
CDC34P49427 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
CDC34P49427 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
CDC34P49427 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
CDC34P49427 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC12.03□□□□□ -0.48
CDC34P49427 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC12.03□□□□□ -0.48
CDC34P49427 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC12.03□□□□□ -0.48
CDC34P49427 STIM1-220ENST00000616714 4356 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
CDC34P49427 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC12.03□□□□□ -0.48
CDC34P49427 CELSR1-201ENST00000262738 11389 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CDC34P49427 ZNF275-201ENST00000370249 5920 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CDC34P49427 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC12.03□□□□□ -0.48
CDC34P49427 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
CDC34P49427 ASAP1-201ENST00000357668 6344 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
CDC34P49427 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
CDC34P49427 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC12.03□□□□□ -0.48
CDC34P49427 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
CDC34P49427 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
CDC34P49427 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC12.02□□□□□ -0.48
CDC34P49427 CACNA1G-220ENST00000507896 6600 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
CDC34P49427 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC12.02□□□□□ -0.48
CDC34P49427 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
CDC34P49427 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.48
CDC34P49427 ZMIZ2-206ENST00000441627 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.02□□□□□ -0.48
CDC34P49427 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
CDC34P49427 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
CDC34P49427 USP51-201ENST00000500968 4407 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
CDC34P49427 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
CDC34P49427 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
CDC34P49427 CD99L2-205ENST00000437787 3493 ntTSL 2 BASIC12.02□□□□□ -0.48
CDC34P49427 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC12.02□□□□□ -0.48
CDC34P49427 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
CDC34P49427 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC12.02□□□□□ -0.48
CDC34P49427 ANKZF1-202ENST00000409849 2155 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
CDC34P49427 STRCP1-201ENST00000509801 5328 ntBASIC12.02□□□□□ -0.48
CDC34P49427 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC12.02□□□□□ -0.48
CDC34P49427 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
CDC34P49427 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.48
CDC34P49427 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
CDC34P49427 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC12.02□□□□□ -0.49
CDC34P49427 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC12.02□□□□□ -0.49
CDC34P49427 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC12.02□□□□□ -0.49
CDC34P49427 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
CDC34P49427 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
CDC34P49427 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC12.02□□□□□ -0.49
CDC34P49427 SYS1-203ENST00000414310 795 ntTSL 3 BASIC12.02□□□□□ -0.49
CDC34P49427 FAM197Y8-203ENST00000450145 560 ntBASIC12.02□□□□□ -0.49
CDC34P49427 AC022447.6-201ENST00000515522 438 ntBASIC12.02□□□□□ -0.49
CDC34P49427 TOLLIP-AS1-201ENST00000530897 939 ntBASIC12.02□□□□□ -0.49
CDC34P49427 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
CDC34P49427 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
CDC34P49427 RMI2-205ENST00000576027 818 ntTSL 2 BASIC12.02□□□□□ -0.49
CDC34P49427 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC12.02□□□□□ -0.49
CDC34P49427 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC12.02□□□□□ -0.49
CDC34P49427 AQP6-205ENST00000618286 829 ntTSL 5 BASIC12.02□□□□□ -0.49
CDC34P49427 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
CDC34P49427 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC12.02□□□□□ -0.49
CDC34P49427 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC12.02□□□□□ -0.49
CDC34P49427 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
CDC34P49427 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC12.02□□□□□ -0.49
CDC34P49427 GFAP-214ENST00000588735 6538 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
CDC34P49427 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC12.02□□□□□ -0.49
CDC34P49427 BCAR1-209ENST00000546196 1340 ntBASIC12.02□□□□□ -0.49
CDC34P49427 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
CDC34P49427 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
CDC34P49427 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
CDC34P49427 WDR66-201ENST00000288912 4467 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
CDC34P49427 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.49
CDC34P49427 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
CDC34P49427 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC12.02□□□□□ -0.49
CDC34P49427 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
CDC34P49427 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
CDC34P49427 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
CDC34P49427 PRR12-201ENST00000418929 6955 ntAPPRIS P2 TSL 5 BASIC12.02□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms