Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SSR1P43307 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SSR1P43307 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SSR1P43307 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SSR1P43307 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SSR1P43307 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC16.21■□□□□ 0.19
SSR1P43307 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
SSR1P43307 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SSR1P43307 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SSR1P43307 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC16.21■□□□□ 0.19
SSR1P43307 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
SSR1P43307 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SSR1P43307 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
SSR1P43307 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC16.21■□□□□ 0.19
SSR1P43307 AC241585.1-201ENST00000433527 519 ntBASIC16.21■□□□□ 0.19
SSR1P43307 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC16.21■□□□□ 0.19
SSR1P43307 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SSR1P43307 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC16.21■□□□□ 0.19
SSR1P43307 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
SSR1P43307 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC16.21■□□□□ 0.19
SSR1P43307 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC16.21■□□□□ 0.19
SSR1P43307 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC16.21■□□□□ 0.19
SSR1P43307 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
SSR1P43307 TBCB-211ENST00000589996 724 ntTSL 3 BASIC16.21■□□□□ 0.19
SSR1P43307 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC16.21■□□□□ 0.19
SSR1P43307 AL844908.2-201ENST00000609461 460 ntBASIC16.21■□□□□ 0.19
SSR1P43307 AC004461.2-201ENST00000629517 803 ntBASIC16.21■□□□□ 0.19
SSR1P43307 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC16.21■□□□□ 0.19
SSR1P43307 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SSR1P43307 AC138969.3-201ENST00000546612 1459 ntBASIC16.21■□□□□ 0.19
SSR1P43307 AC138932.2-201ENST00000548268 1459 ntBASIC16.21■□□□□ 0.19
SSR1P43307 AC126755.4-201ENST00000549796 1459 ntBASIC16.21■□□□□ 0.19
SSR1P43307 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
SSR1P43307 NHLH2-202ENST00000369506 7226 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
SSR1P43307 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
SSR1P43307 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC16.21■□□□□ 0.18
SSR1P43307 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
SSR1P43307 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
SSR1P43307 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
SSR1P43307 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SSR1P43307 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SSR1P43307 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC16.2■□□□□ 0.18
SSR1P43307 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC16.2■□□□□ 0.18
SSR1P43307 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SSR1P43307 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC16.2■□□□□ 0.18
SSR1P43307 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC16.2■□□□□ 0.18
SSR1P43307 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC16.2■□□□□ 0.18
SSR1P43307 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC16.2■□□□□ 0.18
SSR1P43307 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC16.2■□□□□ 0.18
SSR1P43307 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC16.2■□□□□ 0.18
SSR1P43307 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC16.2■□□□□ 0.18
SSR1P43307 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SSR1P43307 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SSR1P43307 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
SSR1P43307 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SSR1P43307 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC16.2■□□□□ 0.18
SSR1P43307 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SSR1P43307 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
SSR1P43307 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SSR1P43307 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SSR1P43307 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SSR1P43307 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
SSR1P43307 PON3-203ENST00000427422 894 ntTSL 3 BASIC16.2■□□□□ 0.18
SSR1P43307 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC16.2■□□□□ 0.18
SSR1P43307 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SSR1P43307 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC16.2■□□□□ 0.18
SSR1P43307 SSH2-210ENST00000582084 560 ntTSL 3 BASIC16.2■□□□□ 0.18
SSR1P43307 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC16.2■□□□□ 0.18
SSR1P43307 AC106028.4-201ENST00000614509 607 ntBASIC16.2■□□□□ 0.18
SSR1P43307 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC16.2■□□□□ 0.18
SSR1P43307 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC16.2■□□□□ 0.18
SSR1P43307 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SSR1P43307 SFMBT2-203ENST00000379713 2402 ntTSL 2 BASIC16.2■□□□□ 0.18
SSR1P43307 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SSR1P43307 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SSR1P43307 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SSR1P43307 CICP20-201ENST00000443330 2801 ntBASIC16.2■□□□□ 0.18
SSR1P43307 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SSR1P43307 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC16.2■□□□□ 0.18
SSR1P43307 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC16.2■□□□□ 0.18
SSR1P43307 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC16.2■□□□□ 0.18
SSR1P43307 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SSR1P43307 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC16.2■□□□□ 0.18
SSR1P43307 FUK-202ENST00000378912 3925 ntTSL 2 BASIC16.2■□□□□ 0.18
SSR1P43307 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SSR1P43307 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SSR1P43307 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SSR1P43307 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC16.19■□□□□ 0.18
SSR1P43307 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
SSR1P43307 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SSR1P43307 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SSR1P43307 AP000845.1-201ENST00000581677 2131 ntBASIC16.19■□□□□ 0.18
SSR1P43307 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC16.19■□□□□ 0.18
SSR1P43307 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SSR1P43307 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SSR1P43307 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
SSR1P43307 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
SSR1P43307 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC16.19■□□□□ 0.18
SSR1P43307 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SSR1P43307 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms