Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 MIR4683-201ENST00000579659 81 ntBASIC15.47■□□□□ 0.07
SLC6A4P31645 EEF1DP1-201ENST00000585891 896 ntBASIC15.47■□□□□ 0.07
SLC6A4P31645 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC15.47■□□□□ 0.07
SLC6A4P31645 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC15.47■□□□□ 0.07
SLC6A4P31645 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
SLC6A4P31645 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC15.47■□□□□ 0.07
SLC6A4P31645 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SLC6A4P31645 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
SLC6A4P31645 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC15.47■□□□□ 0.07
SLC6A4P31645 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
SLC6A4P31645 AC003102.2-201ENST00000589195 1469 ntBASIC15.46■□□□□ 0.07
SLC6A4P31645 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
SLC6A4P31645 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
SLC6A4P31645 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SLC6A4P31645 AL138725.1-201ENST00000407347 1314 ntBASIC15.46■□□□□ 0.07
SLC6A4P31645 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
SLC6A4P31645 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC15.46■□□□□ 0.07
SLC6A4P31645 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC15.46■□□□□ 0.07
SLC6A4P31645 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SLC6A4P31645 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC15.46■□□□□ 0.07
SLC6A4P31645 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
SLC6A4P31645 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
SLC6A4P31645 TISP43-201ENST00000409793 538 ntTSL 4 BASIC15.46■□□□□ 0.07
SLC6A4P31645 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
SLC6A4P31645 CHMP1AP1-201ENST00000445563 662 ntBASIC15.46■□□□□ 0.07
SLC6A4P31645 Z93015.1-201ENST00000451718 390 ntBASIC15.46■□□□□ 0.07
SLC6A4P31645 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
SLC6A4P31645 RPSAP36-202ENST00000494591 1261 ntBASIC15.46■□□□□ 0.07
SLC6A4P31645 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC15.46■□□□□ 0.07
SLC6A4P31645 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
SLC6A4P31645 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
SLC6A4P31645 RN7SL219P-201ENST00000582872 296 ntBASIC15.46■□□□□ 0.07
SLC6A4P31645 ZACNP1-201ENST00000612259 710 ntBASIC15.46■□□□□ 0.07
SLC6A4P31645 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC15.46■□□□□ 0.07
SLC6A4P31645 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC15.46■□□□□ 0.07
SLC6A4P31645 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SLC6A4P31645 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SLC6A4P31645 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC15.46■□□□□ 0.07
SLC6A4P31645 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
SLC6A4P31645 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SLC6A4P31645 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC15.46■□□□□ 0.07
SLC6A4P31645 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
SLC6A4P31645 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC15.46■□□□□ 0.06
SLC6A4P31645 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC15.46■□□□□ 0.06
SLC6A4P31645 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.06
SLC6A4P31645 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC15.46■□□□□ 0.06
SLC6A4P31645 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC15.45■□□□□ 0.06
SLC6A4P31645 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC15.45■□□□□ 0.06
SLC6A4P31645 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC15.45■□□□□ 0.06
SLC6A4P31645 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC15.45■□□□□ 0.06
SLC6A4P31645 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
SLC6A4P31645 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SLC6A4P31645 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SLC6A4P31645 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SLC6A4P31645 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
SLC6A4P31645 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SLC6A4P31645 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SLC6A4P31645 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC15.45■□□□□ 0.06
SLC6A4P31645 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
SLC6A4P31645 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
SLC6A4P31645 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SLC6A4P31645 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
SLC6A4P31645 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC15.45■□□□□ 0.06
SLC6A4P31645 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC15.45■□□□□ 0.06
SLC6A4P31645 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SLC6A4P31645 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SLC6A4P31645 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SLC6A4P31645 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
SLC6A4P31645 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
SLC6A4P31645 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
SLC6A4P31645 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
SLC6A4P31645 HIST2H2BB-201ENST00000449108 381 ntBASIC15.45■□□□□ 0.06
SLC6A4P31645 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
SLC6A4P31645 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
SLC6A4P31645 KLK3-211ENST00000597483 810 ntTSL 2 BASIC15.45■□□□□ 0.06
SLC6A4P31645 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC15.45■□□□□ 0.06
SLC6A4P31645 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
SLC6A4P31645 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SLC6A4P31645 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC15.45■□□□□ 0.06
SLC6A4P31645 AC068587.6-202ENST00000641839 5619 ntBASIC15.45■□□□□ 0.06
SLC6A4P31645 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
SLC6A4P31645 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SLC6A4P31645 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
SLC6A4P31645 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC15.45■□□□□ 0.06
SLC6A4P31645 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
SLC6A4P31645 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC15.45■□□□□ 0.06
SLC6A4P31645 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SLC6A4P31645 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
SLC6A4P31645 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SLC6A4P31645 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SLC6A4P31645 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC15.45■□□□□ 0.06
SLC6A4P31645 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
SLC6A4P31645 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SLC6A4P31645 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SLC6A4P31645 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SLC6A4P31645 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC15.44■□□□□ 0.06
SLC6A4P31645 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SLC6A4P31645 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
SLC6A4P31645 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
SLC6A4P31645 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms