Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CAPN3P20807 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC14.63□□□□□ -0.07
CAPN3P20807 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC14.63□□□□□ -0.07
CAPN3P20807 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CAPN3P20807 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CAPN3P20807 AC010327.5-201ENST00000586923 3061 ntBASIC14.63□□□□□ -0.07
CAPN3P20807 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CAPN3P20807 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CAPN3P20807 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CAPN3P20807 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CAPN3P20807 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
CAPN3P20807 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
CAPN3P20807 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CAPN3P20807 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CAPN3P20807 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
CAPN3P20807 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CAPN3P20807 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
CAPN3P20807 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
CAPN3P20807 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC14.63□□□□□ -0.07
CAPN3P20807 AL080243.2-201ENST00000418783 582 ntBASIC14.63□□□□□ -0.07
CAPN3P20807 SERBP1P5-201ENST00000510079 1181 ntBASIC14.63□□□□□ -0.07
CAPN3P20807 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC14.63□□□□□ -0.07
CAPN3P20807 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC14.63□□□□□ -0.07
CAPN3P20807 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC14.63□□□□□ -0.07
CAPN3P20807 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC14.63□□□□□ -0.07
CAPN3P20807 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC14.63□□□□□ -0.07
CAPN3P20807 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC14.63□□□□□ -0.07
CAPN3P20807 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
CAPN3P20807 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CAPN3P20807 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
CAPN3P20807 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
CAPN3P20807 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CAPN3P20807 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CAPN3P20807 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC14.63□□□□□ -0.07
CAPN3P20807 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC14.63□□□□□ -0.07
CAPN3P20807 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CAPN3P20807 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CAPN3P20807 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC14.63□□□□□ -0.07
CAPN3P20807 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
CAPN3P20807 BEND3P1-201ENST00000421591 1944 ntBASIC14.62□□□□□ -0.07
CAPN3P20807 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC14.62□□□□□ -0.07
CAPN3P20807 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CAPN3P20807 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC14.62□□□□□ -0.07
CAPN3P20807 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
CAPN3P20807 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CAPN3P20807 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
CAPN3P20807 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CAPN3P20807 AL121723.1-201ENST00000445194 1519 ntBASIC14.62□□□□□ -0.07
CAPN3P20807 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC14.62□□□□□ -0.07
CAPN3P20807 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
CAPN3P20807 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
CAPN3P20807 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
CAPN3P20807 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CAPN3P20807 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CAPN3P20807 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CAPN3P20807 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC14.62□□□□□ -0.07
CAPN3P20807 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
CAPN3P20807 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CAPN3P20807 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CAPN3P20807 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
CAPN3P20807 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC14.62□□□□□ -0.07
CAPN3P20807 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CAPN3P20807 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC14.62□□□□□ -0.07
CAPN3P20807 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CAPN3P20807 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC14.62□□□□□ -0.07
CAPN3P20807 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CAPN3P20807 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CAPN3P20807 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CAPN3P20807 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC14.62□□□□□ -0.07
CAPN3P20807 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC14.62□□□□□ -0.07
CAPN3P20807 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CAPN3P20807 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CAPN3P20807 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC14.62□□□□□ -0.07
CAPN3P20807 LINC01115-203ENST00000606068 577 ntBASIC14.62□□□□□ -0.07
CAPN3P20807 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC14.62□□□□□ -0.07
CAPN3P20807 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
CAPN3P20807 MIR6069-201ENST00000620069 79 ntBASIC14.62□□□□□ -0.07
CAPN3P20807 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CAPN3P20807 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC14.62□□□□□ -0.07
CAPN3P20807 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC14.62□□□□□ -0.07
CAPN3P20807 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CAPN3P20807 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CAPN3P20807 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
CAPN3P20807 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CAPN3P20807 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CAPN3P20807 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC14.62□□□□□ -0.07
CAPN3P20807 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CAPN3P20807 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CAPN3P20807 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CAPN3P20807 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC14.62□□□□□ -0.07
CAPN3P20807 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CAPN3P20807 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CAPN3P20807 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CAPN3P20807 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
CAPN3P20807 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
CAPN3P20807 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
CAPN3P20807 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CAPN3P20807 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CAPN3P20807 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CAPN3P20807 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms