Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
FREM3P0C091 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC13.73□□□□□ -0.21
FREM3P0C091 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
FREM3P0C091 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
FREM3P0C091 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC13.73□□□□□ -0.21
FREM3P0C091 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
FREM3P0C091 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
FREM3P0C091 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
FREM3P0C091 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC13.73□□□□□ -0.21
FREM3P0C091 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
FREM3P0C091 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC13.73□□□□□ -0.21
FREM3P0C091 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
FREM3P0C091 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC13.73□□□□□ -0.21
FREM3P0C091 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC13.73□□□□□ -0.21
FREM3P0C091 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC13.73□□□□□ -0.21
FREM3P0C091 RGS5-214ENST00000429865 754 ntTSL 3 BASIC13.73□□□□□ -0.21
FREM3P0C091 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC13.73□□□□□ -0.21
FREM3P0C091 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC13.73□□□□□ -0.21
FREM3P0C091 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC13.73□□□□□ -0.21
FREM3P0C091 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC13.73□□□□□ -0.21
FREM3P0C091 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
FREM3P0C091 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC13.73□□□□□ -0.21
FREM3P0C091 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
FREM3P0C091 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC13.73□□□□□ -0.21
FREM3P0C091 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC13.73□□□□□ -0.21
FREM3P0C091 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
FREM3P0C091 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
FREM3P0C091 CLUHP2-201ENST00000426660 1303 ntBASIC13.72□□□□□ -0.21
FREM3P0C091 AL513477.1-201ENST00000602865 2407 ntBASIC13.72□□□□□ -0.21
FREM3P0C091 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC13.72□□□□□ -0.21
FREM3P0C091 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
FREM3P0C091 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
FREM3P0C091 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
FREM3P0C091 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
FREM3P0C091 MIR1908-201ENST00000410394 80 ntBASIC13.72□□□□□ -0.21
FREM3P0C091 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC13.72□□□□□ -0.21
FREM3P0C091 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
FREM3P0C091 RPL13AP20-201ENST00000459725 609 ntBASIC13.72□□□□□ -0.21
FREM3P0C091 AC092658.1-201ENST00000505836 891 ntBASIC13.72□□□□□ -0.21
FREM3P0C091 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC13.72□□□□□ -0.21
FREM3P0C091 AC005730.2-201ENST00000564549 1184 ntBASIC13.72□□□□□ -0.21
FREM3P0C091 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC13.72□□□□□ -0.21
FREM3P0C091 AC010328.2-201ENST00000597698 1111 ntBASIC13.72□□□□□ -0.21
FREM3P0C091 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
FREM3P0C091 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
FREM3P0C091 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
FREM3P0C091 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
FREM3P0C091 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
FREM3P0C091 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC13.72□□□□□ -0.21
FREM3P0C091 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
FREM3P0C091 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
FREM3P0C091 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
FREM3P0C091 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
FREM3P0C091 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC13.72□□□□□ -0.21
FREM3P0C091 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
FREM3P0C091 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC13.72□□□□□ -0.21
FREM3P0C091 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
FREM3P0C091 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
FREM3P0C091 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
FREM3P0C091 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC13.72□□□□□ -0.21
FREM3P0C091 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC13.72□□□□□ -0.21
FREM3P0C091 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
FREM3P0C091 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC13.72□□□□□ -0.21
FREM3P0C091 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
FREM3P0C091 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
FREM3P0C091 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC13.72□□□□□ -0.21
FREM3P0C091 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
FREM3P0C091 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
FREM3P0C091 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
FREM3P0C091 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC13.72□□□□□ -0.21
FREM3P0C091 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
FREM3P0C091 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
FREM3P0C091 MIR663B-201ENST00000408361 115 ntBASIC13.72□□□□□ -0.21
FREM3P0C091 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC13.72□□□□□ -0.21
FREM3P0C091 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC13.72□□□□□ -0.21
FREM3P0C091 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC13.72□□□□□ -0.21
FREM3P0C091 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC13.72□□□□□ -0.21
FREM3P0C091 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC13.72□□□□□ -0.21
FREM3P0C091 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
FREM3P0C091 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
FREM3P0C091 AC023090.2-201ENST00000625182 2110 ntBASIC13.72□□□□□ -0.21
FREM3P0C091 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
FREM3P0C091 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
FREM3P0C091 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
FREM3P0C091 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
FREM3P0C091 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC13.71□□□□□ -0.21
FREM3P0C091 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
FREM3P0C091 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
FREM3P0C091 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
FREM3P0C091 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
FREM3P0C091 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
FREM3P0C091 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
FREM3P0C091 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC13.71□□□□□ -0.21
FREM3P0C091 AC138969.2-201ENST00000532739 9932 ntBASIC13.71□□□□□ -0.21
FREM3P0C091 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC13.71□□□□□ -0.21
FREM3P0C091 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
FREM3P0C091 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC13.71□□□□□ -0.21
FREM3P0C091 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
FREM3P0C091 USP28-214ENST00000545540 3431 ntTSL 2 BASIC13.71□□□□□ -0.21
FREM3P0C091 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms