Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
TPM3P06753 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TPM3P06753 HADH-202ENST00000403312 1752 ntTSL 5 BASIC17.04■□□□□ 0.32
TPM3P06753 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TPM3P06753 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TPM3P06753 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TPM3P06753 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
TPM3P06753 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TPM3P06753 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TPM3P06753 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC17.04■□□□□ 0.32
TPM3P06753 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TPM3P06753 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TPM3P06753 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TPM3P06753 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
TPM3P06753 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC17.04■□□□□ 0.32
TPM3P06753 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC17.04■□□□□ 0.32
TPM3P06753 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TPM3P06753 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC17.03■□□□□ 0.32
TPM3P06753 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC17.03■□□□□ 0.32
TPM3P06753 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
TPM3P06753 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TPM3P06753 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC17.03■□□□□ 0.32
TPM3P06753 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC17.03■□□□□ 0.32
TPM3P06753 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
TPM3P06753 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
TPM3P06753 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC17.03■□□□□ 0.32
TPM3P06753 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TPM3P06753 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TPM3P06753 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TPM3P06753 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TPM3P06753 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TPM3P06753 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TPM3P06753 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC17.03■□□□□ 0.32
TPM3P06753 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TPM3P06753 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TPM3P06753 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TPM3P06753 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC17.03■□□□□ 0.32
TPM3P06753 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
TPM3P06753 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TPM3P06753 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC17.03■□□□□ 0.32
TPM3P06753 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC17.03■□□□□ 0.32
TPM3P06753 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC17.03■□□□□ 0.32
TPM3P06753 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TPM3P06753 AC084121.4-201ENST00000641598 221 ntBASIC17.03■□□□□ 0.32
TPM3P06753 AC092902.6-201ENST00000641783 218 ntBASIC17.03■□□□□ 0.32
TPM3P06753 AF228730.8-201ENST00000642140 221 ntBASIC17.03■□□□□ 0.32
TPM3P06753 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TPM3P06753 STAB1-201ENST00000321725 7928 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TPM3P06753 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC17.03■□□□□ 0.32
TPM3P06753 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC17.03■□□□□ 0.32
TPM3P06753 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TPM3P06753 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC17.03■□□□□ 0.32
TPM3P06753 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC17.03■□□□□ 0.32
TPM3P06753 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
TPM3P06753 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TPM3P06753 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
TPM3P06753 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC17.03■□□□□ 0.32
TPM3P06753 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TPM3P06753 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
TPM3P06753 KRT8P22-201ENST00000562317 1415 ntBASIC17.03■□□□□ 0.32
TPM3P06753 AC007787.1-201ENST00000588095 1583 ntBASIC17.02■□□□□ 0.32
TPM3P06753 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
TPM3P06753 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC17.02■□□□□ 0.32
TPM3P06753 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC17.02■□□□□ 0.32
TPM3P06753 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TPM3P06753 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
TPM3P06753 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC17.02■□□□□ 0.32
TPM3P06753 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC17.02■□□□□ 0.32
TPM3P06753 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TPM3P06753 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
TPM3P06753 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TPM3P06753 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TPM3P06753 AL591122.2-201ENST00000624125 1853 ntBASIC17.02■□□□□ 0.32
TPM3P06753 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TPM3P06753 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC17.02■□□□□ 0.32
TPM3P06753 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
TPM3P06753 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC17.02■□□□□ 0.32
TPM3P06753 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC17.02■□□□□ 0.32
TPM3P06753 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC17.02■□□□□ 0.32
TPM3P06753 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC17.02■□□□□ 0.32
TPM3P06753 SLC25A39P2-201ENST00000537614 270 ntBASIC17.02■□□□□ 0.32
TPM3P06753 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC17.02■□□□□ 0.32
TPM3P06753 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC17.02■□□□□ 0.32
TPM3P06753 AL645728.2-202ENST00000641679 227 ntBASIC17.02■□□□□ 0.32
TPM3P06753 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TPM3P06753 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
TPM3P06753 AC099521.3-201ENST00000624251 2938 ntBASIC17.02■□□□□ 0.31
TPM3P06753 KRT8P24-201ENST00000560290 1559 ntBASIC17.02■□□□□ 0.31
TPM3P06753 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC17.02■□□□□ 0.31
TPM3P06753 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.31
TPM3P06753 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
TPM3P06753 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TPM3P06753 USP3-204ENST00000540797 5474 ntTSL 2 BASIC17.01■□□□□ 0.31
TPM3P06753 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
TPM3P06753 GRIP2-204ENST00000619221 7977 ntAPPRIS P5 TSL 5 BASIC17.01■□□□□ 0.31
TPM3P06753 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC17.01■□□□□ 0.31
TPM3P06753 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TPM3P06753 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TPM3P06753 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC17.01■□□□□ 0.31
TPM3P06753 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms