Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC16.28■□□□□ 0.2
CHRNA1P02708 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
CHRNA1P02708 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CHRNA1P02708 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
CHRNA1P02708 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CHRNA1P02708 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC16.28■□□□□ 0.2
CHRNA1P02708 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CHRNA1P02708 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC16.28■□□□□ 0.2
CHRNA1P02708 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CHRNA1P02708 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CHRNA1P02708 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC16.28■□□□□ 0.2
CHRNA1P02708 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
CHRNA1P02708 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CHRNA1P02708 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CHRNA1P02708 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CHRNA1P02708 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CHRNA1P02708 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC16.28■□□□□ 0.2
CHRNA1P02708 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC16.28■□□□□ 0.2
CHRNA1P02708 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC16.28■□□□□ 0.2
CHRNA1P02708 SKA2-202ENST00000437036 625 ntTSL 2 BASIC16.28■□□□□ 0.2
CHRNA1P02708 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC16.28■□□□□ 0.2
CHRNA1P02708 FTLP1-201ENST00000449155 526 ntBASIC16.28■□□□□ 0.2
CHRNA1P02708 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC16.28■□□□□ 0.2
CHRNA1P02708 AC234782.1-201ENST00000451950 919 ntBASIC16.28■□□□□ 0.2
CHRNA1P02708 CICP12-201ENST00000455801 843 ntBASIC16.28■□□□□ 0.2
CHRNA1P02708 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC16.28■□□□□ 0.2
CHRNA1P02708 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC16.28■□□□□ 0.2
CHRNA1P02708 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC16.28■□□□□ 0.2
CHRNA1P02708 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC16.28■□□□□ 0.2
CHRNA1P02708 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC16.28■□□□□ 0.2
CHRNA1P02708 CDK7-214ENST00000626796 358 ntTSL 5 BASIC16.28■□□□□ 0.2
CHRNA1P02708 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC16.28■□□□□ 0.2
CHRNA1P02708 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC16.28■□□□□ 0.2
CHRNA1P02708 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CHRNA1P02708 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CHRNA1P02708 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
CHRNA1P02708 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CHRNA1P02708 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
CHRNA1P02708 AC126365.1-201ENST00000578585 1514 ntBASIC16.28■□□□□ 0.2
CHRNA1P02708 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CHRNA1P02708 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC16.28■□□□□ 0.2
CHRNA1P02708 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CHRNA1P02708 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CHRNA1P02708 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CHRNA1P02708 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CHRNA1P02708 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC16.28■□□□□ 0.2
CHRNA1P02708 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
CHRNA1P02708 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
CHRNA1P02708 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CHRNA1P02708 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CHRNA1P02708 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC16.27■□□□□ 0.2
CHRNA1P02708 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CHRNA1P02708 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CHRNA1P02708 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CHRNA1P02708 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CHRNA1P02708 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CHRNA1P02708 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC16.27■□□□□ 0.2
CHRNA1P02708 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
CHRNA1P02708 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CHRNA1P02708 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CHRNA1P02708 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
CHRNA1P02708 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CHRNA1P02708 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CHRNA1P02708 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CHRNA1P02708 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC16.27■□□□□ 0.2
CHRNA1P02708 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CHRNA1P02708 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CHRNA1P02708 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC16.27■□□□□ 0.2
CHRNA1P02708 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC16.27■□□□□ 0.2
CHRNA1P02708 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC16.27■□□□□ 0.2
CHRNA1P02708 AC116345.2-201ENST00000512837 523 ntBASIC16.27■□□□□ 0.2
CHRNA1P02708 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC16.27■□□□□ 0.2
CHRNA1P02708 FADS2-212ENST00000522639 360 ntTSL 5 BASIC16.27■□□□□ 0.2
CHRNA1P02708 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC16.27■□□□□ 0.2
CHRNA1P02708 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC16.27■□□□□ 0.2
CHRNA1P02708 FADS2-215ENST00000574708 385 ntTSL 3 BASIC16.27■□□□□ 0.2
CHRNA1P02708 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC16.27■□□□□ 0.2
CHRNA1P02708 AC009884.2-201ENST00000603110 324 ntBASIC16.27■□□□□ 0.2
CHRNA1P02708 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC16.27■□□□□ 0.2
CHRNA1P02708 AC027601.3-201ENST00000622907 509 ntBASIC16.27■□□□□ 0.2
CHRNA1P02708 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC16.27■□□□□ 0.2
CHRNA1P02708 NAP1L6-202ENST00000641404 1222 ntBASIC16.27■□□□□ 0.2
CHRNA1P02708 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
CHRNA1P02708 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CHRNA1P02708 SSR4P1-203ENST00000599569 2260 ntBASIC16.27■□□□□ 0.2
CHRNA1P02708 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC16.27■□□□□ 0.2
CHRNA1P02708 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC16.27■□□□□ 0.2
CHRNA1P02708 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CHRNA1P02708 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CHRNA1P02708 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
CHRNA1P02708 AL513477.1-201ENST00000602865 2407 ntBASIC16.27■□□□□ 0.19
CHRNA1P02708 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CHRNA1P02708 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC16.27■□□□□ 0.19
CHRNA1P02708 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.19
CHRNA1P02708 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CHRNA1P02708 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
CHRNA1P02708 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
CHRNA1P02708 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CHRNA1P02708 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CHRNA1P02708 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms