Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
ALDH1A1P00352 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ALDH1A1P00352 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
ALDH1A1P00352 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
ALDH1A1P00352 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ALDH1A1P00352 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ALDH1A1P00352 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC16.94■□□□□ 0.3
ALDH1A1P00352 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC16.94■□□□□ 0.3
ALDH1A1P00352 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
ALDH1A1P00352 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
ALDH1A1P00352 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ALDH1A1P00352 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC16.94■□□□□ 0.3
ALDH1A1P00352 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC16.94■□□□□ 0.3
ALDH1A1P00352 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
ALDH1A1P00352 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
ALDH1A1P00352 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC16.94■□□□□ 0.3
ALDH1A1P00352 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
ALDH1A1P00352 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ALDH1A1P00352 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
ALDH1A1P00352 BGLAP-201ENST00000368272 732 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ALDH1A1P00352 SLC50A1-202ENST00000368401 1166 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
ALDH1A1P00352 IGLC1-201ENST00000390321 460 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
ALDH1A1P00352 CXCL12-205ENST00000395794 1052 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
ALDH1A1P00352 LIF-202ENST00000403987 592 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
ALDH1A1P00352 AL135901.1-201ENST00000451812 333 ntBASIC16.94■□□□□ 0.3
ALDH1A1P00352 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
ALDH1A1P00352 SH3BGR-209ENST00000458295 812 ntTSL 3 BASIC16.94■□□□□ 0.3
ALDH1A1P00352 AP005212.2-201ENST00000584979 510 ntBASIC16.94■□□□□ 0.3
ALDH1A1P00352 EIF5AP2-201ENST00000585668 1047 ntBASIC16.94■□□□□ 0.3
ALDH1A1P00352 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
ALDH1A1P00352 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ALDH1A1P00352 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
ALDH1A1P00352 TMBIM7P-202ENST00000641474 1516 ntBASIC16.94■□□□□ 0.3
ALDH1A1P00352 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
ALDH1A1P00352 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC16.94■□□□□ 0.3
ALDH1A1P00352 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
ALDH1A1P00352 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
ALDH1A1P00352 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ALDH1A1P00352 MEIKIN-205ENST00000616644 1438 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
ALDH1A1P00352 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
ALDH1A1P00352 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ALDH1A1P00352 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
ALDH1A1P00352 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ALDH1A1P00352 REXO1L4P-201ENST00000605109 1937 ntBASIC16.94■□□□□ 0.3
ALDH1A1P00352 TNFRSF1A-202ENST00000366159 1339 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
ALDH1A1P00352 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ALDH1A1P00352 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
ALDH1A1P00352 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ALDH1A1P00352 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC16.93■□□□□ 0.3
ALDH1A1P00352 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
ALDH1A1P00352 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ALDH1A1P00352 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ALDH1A1P00352 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
ALDH1A1P00352 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC16.93■□□□□ 0.3
ALDH1A1P00352 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ALDH1A1P00352 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
ALDH1A1P00352 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
ALDH1A1P00352 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ALDH1A1P00352 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ALDH1A1P00352 POLR2L-201ENST00000322028 892 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ALDH1A1P00352 SPATA8-201ENST00000328504 1083 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
ALDH1A1P00352 COX20P1-201ENST00000366529 357 ntBASIC16.93■□□□□ 0.3
ALDH1A1P00352 MAPK3-204ENST00000395200 997 ntTSL 3 BASIC16.93■□□□□ 0.3
ALDH1A1P00352 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
ALDH1A1P00352 AL355803.1-201ENST00000455524 188 ntTSL 2 BASIC16.93■□□□□ 0.3
ALDH1A1P00352 OR2T27-202ENST00000460972 1136 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
ALDH1A1P00352 TMEM222-204ENST00000466759 368 ntTSL 3 BASIC16.93■□□□□ 0.3
ALDH1A1P00352 AL691482.3-201ENST00000504773 987 ntTSL 2 BASIC16.93■□□□□ 0.3
ALDH1A1P00352 GCOM2-201ENST00000509133 1104 ntBASIC16.93■□□□□ 0.3
ALDH1A1P00352 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC16.93■□□□□ 0.3
ALDH1A1P00352 HIST2H2BF-204ENST00000545683 999 ntTSL 2 BASIC16.93■□□□□ 0.3
ALDH1A1P00352 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC16.93■□□□□ 0.3
ALDH1A1P00352 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC16.93■□□□□ 0.3
ALDH1A1P00352 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC16.93■□□□□ 0.3
ALDH1A1P00352 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
ALDH1A1P00352 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
ALDH1A1P00352 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
ALDH1A1P00352 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ALDH1A1P00352 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
ALDH1A1P00352 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC16.93■□□□□ 0.3
ALDH1A1P00352 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC16.93■□□□□ 0.3
ALDH1A1P00352 PSMC4-202ENST00000455878 1333 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
ALDH1A1P00352 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC16.92■□□□□ 0.3
ALDH1A1P00352 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ALDH1A1P00352 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC16.92■□□□□ 0.3
ALDH1A1P00352 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ALDH1A1P00352 SALL4P5-201ENST00000419001 1760 ntBASIC16.92■□□□□ 0.3
ALDH1A1P00352 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
ALDH1A1P00352 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
ALDH1A1P00352 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC16.92■□□□□ 0.3
ALDH1A1P00352 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC16.92■□□□□ 0.3
ALDH1A1P00352 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC16.92■□□□□ 0.3
ALDH1A1P00352 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ALDH1A1P00352 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ALDH1A1P00352 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
ALDH1A1P00352 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ALDH1A1P00352 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC16.92■□□□□ 0.3
ALDH1A1P00352 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
ALDH1A1P00352 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC16.92■□□□□ 0.3
ALDH1A1P00352 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms