Protein–RNA interactions for Protein: O75871

CEACAM4, Carcinoembryonic antigen-related cell adhesion molecule 4, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM4O75871 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC13.56□□□□□ -0.24
CEACAM4O75871 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
CEACAM4O75871 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CEACAM4O75871 RHD-203ENST00000357542 1387 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CEACAM4O75871 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC13.56□□□□□ -0.24
CEACAM4O75871 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC13.56□□□□□ -0.24
CEACAM4O75871 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC13.56□□□□□ -0.24
CEACAM4O75871 AC092850.2-201ENST00000623821 2697 ntBASIC13.56□□□□□ -0.24
CEACAM4O75871 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
CEACAM4O75871 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CEACAM4O75871 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CEACAM4O75871 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CEACAM4O75871 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CEACAM4O75871 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
CEACAM4O75871 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CEACAM4O75871 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
CEACAM4O75871 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CEACAM4O75871 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CEACAM4O75871 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CEACAM4O75871 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CEACAM4O75871 AC020658.6-201ENST00000623564 1870 ntBASIC13.55□□□□□ -0.24
CEACAM4O75871 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC13.55□□□□□ -0.24
CEACAM4O75871 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC13.55□□□□□ -0.24
CEACAM4O75871 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
CEACAM4O75871 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC13.55□□□□□ -0.24
CEACAM4O75871 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
CEACAM4O75871 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC13.55□□□□□ -0.24
CEACAM4O75871 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CEACAM4O75871 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC13.55□□□□□ -0.24
CEACAM4O75871 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC13.55□□□□□ -0.24
CEACAM4O75871 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CEACAM4O75871 IL9-201ENST00000274520 591 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CEACAM4O75871 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CEACAM4O75871 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CEACAM4O75871 PSMG4-203ENST00000380306 726 ntTSL 3 BASIC13.55□□□□□ -0.24
CEACAM4O75871 LINC01237-201ENST00000415434 573 ntTSL 4 BASIC13.55□□□□□ -0.24
CEACAM4O75871 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC13.55□□□□□ -0.24
CEACAM4O75871 IDI2-AS1-201ENST00000420381 672 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CEACAM4O75871 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CEACAM4O75871 PTPA-215ENST00000432124 567 ntTSL 4 BASIC13.55□□□□□ -0.24
CEACAM4O75871 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
CEACAM4O75871 XBP1P1-201ENST00000436573 652 ntBASIC13.55□□□□□ -0.24
CEACAM4O75871 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC13.55□□□□□ -0.24
CEACAM4O75871 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CEACAM4O75871 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC13.55□□□□□ -0.24
CEACAM4O75871 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC13.55□□□□□ -0.24
CEACAM4O75871 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
CEACAM4O75871 RBM4B-202ENST00000524637 867 ntTSL 5 BASIC13.55□□□□□ -0.24
CEACAM4O75871 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC13.55□□□□□ -0.24
CEACAM4O75871 UBXN1-214ENST00000533000 367 ntTSL 5 BASIC13.55□□□□□ -0.24
CEACAM4O75871 TPM1-223ENST00000560445 485 ntTSL 3 BASIC13.55□□□□□ -0.24
CEACAM4O75871 DNM1P30-201ENST00000563586 452 ntBASIC13.55□□□□□ -0.24
CEACAM4O75871 AL031713.1-201ENST00000564813 661 ntBASIC13.55□□□□□ -0.24
CEACAM4O75871 PHBP15-201ENST00000574228 665 ntBASIC13.55□□□□□ -0.24
CEACAM4O75871 MIR3677-201ENST00000578964 60 ntBASIC13.55□□□□□ -0.24
CEACAM4O75871 NAT9-220ENST00000582870 896 ntTSL 5 BASIC13.55□□□□□ -0.24
CEACAM4O75871 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC13.55□□□□□ -0.24
CEACAM4O75871 AC138894.2-201ENST00000602838 371 ntBASIC13.55□□□□□ -0.24
CEACAM4O75871 AL109837.1-201ENST00000603272 613 ntBASIC13.55□□□□□ -0.24
CEACAM4O75871 YRDCP1-201ENST00000621419 643 ntBASIC13.55□□□□□ -0.24
CEACAM4O75871 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CEACAM4O75871 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
CEACAM4O75871 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
CEACAM4O75871 CES3-203ENST00000543856 3178 ntTSL 2 BASIC13.55□□□□□ -0.24
CEACAM4O75871 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CEACAM4O75871 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CEACAM4O75871 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CEACAM4O75871 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CEACAM4O75871 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CEACAM4O75871 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CEACAM4O75871 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
CEACAM4O75871 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC13.55□□□□□ -0.24
CEACAM4O75871 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CEACAM4O75871 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
CEACAM4O75871 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC13.55□□□□□ -0.24
CEACAM4O75871 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CEACAM4O75871 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
CEACAM4O75871 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC13.54□□□□□ -0.24
CEACAM4O75871 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CEACAM4O75871 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC13.54□□□□□ -0.24
CEACAM4O75871 MROH4P-201ENST00000431302 1578 ntBASIC13.54□□□□□ -0.24
CEACAM4O75871 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CEACAM4O75871 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
CEACAM4O75871 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
CEACAM4O75871 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CEACAM4O75871 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CEACAM4O75871 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CEACAM4O75871 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC13.54□□□□□ -0.24
CEACAM4O75871 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CEACAM4O75871 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CEACAM4O75871 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CEACAM4O75871 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC13.54□□□□□ -0.24
CEACAM4O75871 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
CEACAM4O75871 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CEACAM4O75871 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
CEACAM4O75871 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC13.54□□□□□ -0.24
CEACAM4O75871 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC13.54□□□□□ -0.24
CEACAM4O75871 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CEACAM4O75871 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CEACAM4O75871 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms