Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 UBL5-208ENST00000593087 320 ntTSL 3 BASIC14.2□□□□□ -0.14
TRIM3O75382 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC14.2□□□□□ -0.14
TRIM3O75382 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC14.2□□□□□ -0.14
TRIM3O75382 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC14.2□□□□□ -0.14
TRIM3O75382 AL591163.1-201ENST00000641757 987 ntBASIC14.2□□□□□ -0.14
TRIM3O75382 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRIM3O75382 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRIM3O75382 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRIM3O75382 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRIM3O75382 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRIM3O75382 AC092127.1-201ENST00000567093 3455 ntBASIC14.2□□□□□ -0.14
TRIM3O75382 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TRIM3O75382 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRIM3O75382 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
TRIM3O75382 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRIM3O75382 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRIM3O75382 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
TRIM3O75382 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRIM3O75382 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRIM3O75382 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC14.2□□□□□ -0.14
TRIM3O75382 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRIM3O75382 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRIM3O75382 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRIM3O75382 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
TRIM3O75382 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRIM3O75382 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRIM3O75382 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
TRIM3O75382 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
TRIM3O75382 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
TRIM3O75382 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
TRIM3O75382 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
TRIM3O75382 AMT-204ENST00000427987 1646 ntTSL 5 BASIC14.19□□□□□ -0.14
TRIM3O75382 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TRIM3O75382 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRIM3O75382 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
TRIM3O75382 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC14.19□□□□□ -0.14
TRIM3O75382 API5-202ENST00000420461 2009 ntTSL 2 BASIC14.19□□□□□ -0.14
TRIM3O75382 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
TRIM3O75382 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TRIM3O75382 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
TRIM3O75382 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC14.19□□□□□ -0.14
TRIM3O75382 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRIM3O75382 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
TRIM3O75382 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRIM3O75382 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRIM3O75382 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC14.19□□□□□ -0.14
TRIM3O75382 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TRIM3O75382 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TRIM3O75382 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC14.19□□□□□ -0.14
TRIM3O75382 GIMAP3P-201ENST00000495150 836 ntBASIC14.19□□□□□ -0.14
TRIM3O75382 AC026410.3-201ENST00000514280 936 ntBASIC14.19□□□□□ -0.14
TRIM3O75382 AC120045.2-201ENST00000567334 178 ntBASIC14.19□□□□□ -0.14
TRIM3O75382 TBCB-211ENST00000589996 724 ntTSL 3 BASIC14.19□□□□□ -0.14
TRIM3O75382 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC14.19□□□□□ -0.14
TRIM3O75382 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
TRIM3O75382 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC14.19□□□□□ -0.14
TRIM3O75382 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRIM3O75382 AC127383.1-201ENST00000444697 1800 ntBASIC14.19□□□□□ -0.14
TRIM3O75382 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC14.19□□□□□ -0.14
TRIM3O75382 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRIM3O75382 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
TRIM3O75382 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TRIM3O75382 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRIM3O75382 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC14.19□□□□□ -0.14
TRIM3O75382 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC14.19□□□□□ -0.14
TRIM3O75382 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
TRIM3O75382 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TRIM3O75382 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRIM3O75382 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TRIM3O75382 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRIM3O75382 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRIM3O75382 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TRIM3O75382 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRIM3O75382 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRIM3O75382 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRIM3O75382 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC14.18□□□□□ -0.14
TRIM3O75382 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRIM3O75382 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TRIM3O75382 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRIM3O75382 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
TRIM3O75382 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TRIM3O75382 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
TRIM3O75382 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRIM3O75382 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TRIM3O75382 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC14.18□□□□□ -0.14
TRIM3O75382 DRD5P1-201ENST00000456605 1438 ntBASIC14.18□□□□□ -0.14
TRIM3O75382 KRT8P22-201ENST00000562317 1415 ntBASIC14.18□□□□□ -0.14
TRIM3O75382 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
TRIM3O75382 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRIM3O75382 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRIM3O75382 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TRIM3O75382 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
TRIM3O75382 MFF-204ENST00000353339 2186 ntTSL 5 BASIC14.18□□□□□ -0.14
TRIM3O75382 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRIM3O75382 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TRIM3O75382 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRIM3O75382 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
TRIM3O75382 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRIM3O75382 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC14.18□□□□□ -0.14
TRIM3O75382 AL162726.2-201ENST00000438986 1017 ntBASIC14.18□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms