Protein–RNA interactions for Protein: O15516

CLOCK, Circadian locomoter output cycles protein kaput, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCKO15516 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CLOCKO15516 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC14.49□□□□□ -0.09
CLOCKO15516 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
CLOCKO15516 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC14.49□□□□□ -0.09
CLOCKO15516 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
CLOCKO15516 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CLOCKO15516 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CLOCKO15516 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
CLOCKO15516 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC14.48□□□□□ -0.09
CLOCKO15516 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC14.48□□□□□ -0.09
CLOCKO15516 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
CLOCKO15516 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
CLOCKO15516 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC14.48□□□□□ -0.09
CLOCKO15516 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
CLOCKO15516 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC14.48□□□□□ -0.09
CLOCKO15516 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
CLOCKO15516 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CLOCKO15516 AC152010.1-201ENST00000415779 2006 ntBASIC14.48□□□□□ -0.09
CLOCKO15516 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
CLOCKO15516 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CLOCKO15516 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
CLOCKO15516 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CLOCKO15516 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC14.48□□□□□ -0.09
CLOCKO15516 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
CLOCKO15516 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CLOCKO15516 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
CLOCKO15516 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC14.48□□□□□ -0.09
CLOCKO15516 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CLOCKO15516 RNA5SP410-201ENST00000516285 106 ntBASIC14.48□□□□□ -0.09
CLOCKO15516 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC14.48□□□□□ -0.09
CLOCKO15516 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC14.48□□□□□ -0.09
CLOCKO15516 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
CLOCKO15516 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC14.48□□□□□ -0.09
CLOCKO15516 NKG7-205ENST00000600427 520 ntTSL 3 BASIC14.48□□□□□ -0.09
CLOCKO15516 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
CLOCKO15516 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC14.48□□□□□ -0.09
CLOCKO15516 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
CLOCKO15516 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CLOCKO15516 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC14.48□□□□□ -0.09
CLOCKO15516 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC14.48□□□□□ -0.09
CLOCKO15516 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC14.48□□□□□ -0.09
CLOCKO15516 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CLOCKO15516 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CLOCKO15516 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CLOCKO15516 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CLOCKO15516 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
CLOCKO15516 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CLOCKO15516 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CLOCKO15516 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
CLOCKO15516 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC14.48□□□□□ -0.09
CLOCKO15516 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CLOCKO15516 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CLOCKO15516 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC14.48□□□□□ -0.09
CLOCKO15516 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC14.48□□□□□ -0.09
CLOCKO15516 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CLOCKO15516 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC14.47□□□□□ -0.09
CLOCKO15516 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC14.47□□□□□ -0.09
CLOCKO15516 CICP8-201ENST00000455800 2813 ntBASIC14.47□□□□□ -0.09
CLOCKO15516 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC14.47□□□□□ -0.09
CLOCKO15516 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
CLOCKO15516 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CLOCKO15516 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CLOCKO15516 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC14.47□□□□□ -0.09
CLOCKO15516 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CLOCKO15516 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC14.47□□□□□ -0.09
CLOCKO15516 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CLOCKO15516 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CLOCKO15516 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CLOCKO15516 FES-203ENST00000394302 2133 ntTSL 5 BASIC14.47□□□□□ -0.09
CLOCKO15516 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CLOCKO15516 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CLOCKO15516 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC14.47□□□□□ -0.09
CLOCKO15516 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
CLOCKO15516 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CLOCKO15516 AC018442.1-201ENST00000421439 2061 ntBASIC14.47□□□□□ -0.09
CLOCKO15516 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC14.47□□□□□ -0.09
CLOCKO15516 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CLOCKO15516 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC14.47□□□□□ -0.09
CLOCKO15516 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CLOCKO15516 KLK8-202ENST00000320838 456 ntTSL 5 BASIC14.47□□□□□ -0.09
CLOCKO15516 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CLOCKO15516 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CLOCKO15516 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CLOCKO15516 PP14571-201ENST00000404327 934 ntTSL 2 BASIC14.47□□□□□ -0.09
CLOCKO15516 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CLOCKO15516 SPCS2P4-201ENST00000436160 681 ntBASIC14.47□□□□□ -0.09
CLOCKO15516 AC069335.1-201ENST00000489972 472 ntBASIC14.47□□□□□ -0.09
CLOCKO15516 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC14.47□□□□□ -0.09
CLOCKO15516 VPS29-207ENST00000549970 818 ntTSL 3 BASIC14.47□□□□□ -0.09
CLOCKO15516 INO80E-210ENST00000567705 880 ntTSL 3 BASIC14.47□□□□□ -0.09
CLOCKO15516 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CLOCKO15516 Z92544.3-201ENST00000624747 417 ntBASIC14.47□□□□□ -0.09
CLOCKO15516 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC14.47□□□□□ -0.09
CLOCKO15516 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC14.47□□□□□ -0.09
CLOCKO15516 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CLOCKO15516 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
CLOCKO15516 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CLOCKO15516 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CLOCKO15516 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CLOCKO15516 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 59.6 ms