Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
SDCBPO00560 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
SDCBPO00560 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
SDCBPO00560 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
SDCBPO00560 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
SDCBPO00560 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.34
SDCBPO00560 OS9-207ENST00000439210 1946 ntTSL 2 BASIC12.96□□□□□ -0.34
SDCBPO00560 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
SDCBPO00560 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.34
SDCBPO00560 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
SDCBPO00560 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SDCBPO00560 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SDCBPO00560 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SDCBPO00560 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
SDCBPO00560 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SDCBPO00560 TUBB3P1-201ENST00000405796 1332 ntBASIC12.95□□□□□ -0.34
SDCBPO00560 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
SDCBPO00560 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SDCBPO00560 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SDCBPO00560 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC12.95□□□□□ -0.34
SDCBPO00560 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC12.95□□□□□ -0.34
SDCBPO00560 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
SDCBPO00560 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC12.95□□□□□ -0.34
SDCBPO00560 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SDCBPO00560 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC12.95□□□□□ -0.34
SDCBPO00560 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC12.95□□□□□ -0.34
SDCBPO00560 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC12.95□□□□□ -0.34
SDCBPO00560 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SDCBPO00560 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC12.95□□□□□ -0.34
SDCBPO00560 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
SDCBPO00560 TARDBPP1-201ENST00000442013 1203 ntBASIC12.95□□□□□ -0.34
SDCBPO00560 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SDCBPO00560 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC12.95□□□□□ -0.34
SDCBPO00560 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC12.95□□□□□ -0.34
SDCBPO00560 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
SDCBPO00560 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
SDCBPO00560 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC12.95□□□□□ -0.34
SDCBPO00560 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC12.95□□□□□ -0.34
SDCBPO00560 CMC2-214ENST00000565925 640 ntTSL 5 BASIC12.95□□□□□ -0.34
SDCBPO00560 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC12.95□□□□□ -0.34
SDCBPO00560 AC023511.2-201ENST00000618803 211 ntBASIC12.95□□□□□ -0.34
SDCBPO00560 GPER1-207ENST00000619052 571 ntTSL 2 BASIC12.95□□□□□ -0.34
SDCBPO00560 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC12.95□□□□□ -0.34
SDCBPO00560 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC12.95□□□□□ -0.34
SDCBPO00560 AL033527.5-202ENST00000641632 1098 ntBASIC12.95□□□□□ -0.34
SDCBPO00560 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
SDCBPO00560 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
SDCBPO00560 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SDCBPO00560 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC12.95□□□□□ -0.34
SDCBPO00560 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
SDCBPO00560 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SDCBPO00560 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SDCBPO00560 TKT-201ENST00000296289 1931 ntTSL 5 BASIC12.95□□□□□ -0.34
SDCBPO00560 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
SDCBPO00560 FUK-202ENST00000378912 3925 ntTSL 2 BASIC12.95□□□□□ -0.34
SDCBPO00560 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC12.95□□□□□ -0.34
SDCBPO00560 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
SDCBPO00560 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC12.95□□□□□ -0.34
SDCBPO00560 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SDCBPO00560 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SDCBPO00560 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
SDCBPO00560 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC12.95□□□□□ -0.34
SDCBPO00560 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SDCBPO00560 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
SDCBPO00560 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
SDCBPO00560 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SDCBPO00560 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SDCBPO00560 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC12.95□□□□□ -0.34
SDCBPO00560 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC12.95□□□□□ -0.34
SDCBPO00560 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC12.95□□□□□ -0.34
SDCBPO00560 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
SDCBPO00560 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
SDCBPO00560 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC12.94□□□□□ -0.34
SDCBPO00560 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SDCBPO00560 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
SDCBPO00560 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SDCBPO00560 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
SDCBPO00560 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
SDCBPO00560 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SDCBPO00560 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SDCBPO00560 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SDCBPO00560 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SDCBPO00560 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
SDCBPO00560 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SDCBPO00560 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SDCBPO00560 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
SDCBPO00560 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SDCBPO00560 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
SDCBPO00560 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SDCBPO00560 AC018442.1-201ENST00000421439 2061 ntBASIC12.94□□□□□ -0.34
SDCBPO00560 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SDCBPO00560 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
SDCBPO00560 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
SDCBPO00560 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SDCBPO00560 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SDCBPO00560 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SDCBPO00560 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SDCBPO00560 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SDCBPO00560 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
SDCBPO00560 RPL37AP1-201ENST00000412502 279 ntBASIC12.94□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms