Protein–RNA interactions for Protein: O00501

CLDN5, Claudin-5, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN5O00501 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CLDN5O00501 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
CLDN5O00501 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CLDN5O00501 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CLDN5O00501 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC15.91■□□□□ 0.14
CLDN5O00501 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CLDN5O00501 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC15.91■□□□□ 0.14
CLDN5O00501 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CLDN5O00501 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CLDN5O00501 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CLDN5O00501 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC15.91■□□□□ 0.14
CLDN5O00501 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CLDN5O00501 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CLDN5O00501 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
CLDN5O00501 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CLDN5O00501 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
CLDN5O00501 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CLDN5O00501 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC15.91■□□□□ 0.14
CLDN5O00501 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC15.91■□□□□ 0.14
CLDN5O00501 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC15.91■□□□□ 0.14
CLDN5O00501 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC15.91■□□□□ 0.14
CLDN5O00501 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CLDN5O00501 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC15.91■□□□□ 0.14
CLDN5O00501 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CLDN5O00501 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
CLDN5O00501 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
CLDN5O00501 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
CLDN5O00501 SF1-209ENST00000433274 2317 ntTSL 2 BASIC15.91■□□□□ 0.14
CLDN5O00501 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CLDN5O00501 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC15.91■□□□□ 0.14
CLDN5O00501 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
CLDN5O00501 AC009093.2-202ENST00000620513 2079 ntBASIC15.91■□□□□ 0.14
CLDN5O00501 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CLDN5O00501 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CLDN5O00501 AJ011931.1-201ENST00000618749 2492 ntBASIC15.91■□□□□ 0.14
CLDN5O00501 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CLDN5O00501 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CLDN5O00501 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CLDN5O00501 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CLDN5O00501 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC15.91■□□□□ 0.14
CLDN5O00501 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CLDN5O00501 KRT8P4-201ENST00000509735 1454 ntBASIC15.91■□□□□ 0.14
CLDN5O00501 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLDN5O00501 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CLDN5O00501 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLDN5O00501 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLDN5O00501 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLDN5O00501 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC15.9■□□□□ 0.14
CLDN5O00501 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC15.9■□□□□ 0.14
CLDN5O00501 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
CLDN5O00501 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLDN5O00501 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CLDN5O00501 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLDN5O00501 AC011840.2-201ENST00000563063 1520 ntBASIC15.9■□□□□ 0.14
CLDN5O00501 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLDN5O00501 FLJ16779-201ENST00000612722 7638 ntBASIC15.9■□□□□ 0.14
CLDN5O00501 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CLDN5O00501 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLDN5O00501 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLDN5O00501 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CLDN5O00501 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
CLDN5O00501 MIR1908-201ENST00000410394 80 ntBASIC15.9■□□□□ 0.14
CLDN5O00501 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC15.9■□□□□ 0.14
CLDN5O00501 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLDN5O00501 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
CLDN5O00501 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CLDN5O00501 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC15.9■□□□□ 0.14
CLDN5O00501 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CLDN5O00501 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC15.9■□□□□ 0.14
CLDN5O00501 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC15.9■□□□□ 0.14
CLDN5O00501 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC15.9■□□□□ 0.14
CLDN5O00501 RN7SL560P-201ENST00000577943 264 ntBASIC15.9■□□□□ 0.14
CLDN5O00501 RN7SL713P-201ENST00000582127 302 ntBASIC15.9■□□□□ 0.14
CLDN5O00501 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC15.9■□□□□ 0.14
CLDN5O00501 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC15.9■□□□□ 0.14
CLDN5O00501 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC15.9■□□□□ 0.14
CLDN5O00501 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CLDN5O00501 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC15.9■□□□□ 0.14
CLDN5O00501 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLDN5O00501 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLDN5O00501 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC15.9■□□□□ 0.14
CLDN5O00501 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC15.9■□□□□ 0.14
CLDN5O00501 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CLDN5O00501 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC15.9■□□□□ 0.14
CLDN5O00501 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLDN5O00501 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLDN5O00501 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CLDN5O00501 POR-201ENST00000394893 2532 ntTSL 5 BASIC15.9■□□□□ 0.14
CLDN5O00501 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
CLDN5O00501 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
CLDN5O00501 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.14
CLDN5O00501 CICP23-201ENST00000605013 2741 ntBASIC15.89■□□□□ 0.13
CLDN5O00501 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC15.89■□□□□ 0.13
CLDN5O00501 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC15.89■□□□□ 0.13
CLDN5O00501 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC15.89■□□□□ 0.13
CLDN5O00501 TPO-203ENST00000346956 2923 ntTSL 5 BASIC15.89■□□□□ 0.13
CLDN5O00501 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CLDN5O00501 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
CLDN5O00501 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CLDN5O00501 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms