Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
O00370 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
O00370 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC16.15■□□□□ 0.18
O00370 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
O00370 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC16.15■□□□□ 0.18
O00370 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC16.15■□□□□ 0.18
O00370 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
O00370 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
O00370 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC16.15■□□□□ 0.18
O00370 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC16.15■□□□□ 0.18
O00370 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
O00370 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
O00370 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
O00370 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
O00370 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
O00370 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
O00370 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC16.15■□□□□ 0.18
O00370 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
O00370 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
O00370 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
O00370 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
O00370 EDF1-203ENST00000371649 790 ntTSL 2 BASIC16.15■□□□□ 0.18
O00370 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
O00370 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
O00370 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
O00370 ACTBP8-201ENST00000403258 1108 ntBASIC16.15■□□□□ 0.18
O00370 BAATP1-201ENST00000412284 1225 ntBASIC16.15■□□□□ 0.18
O00370 TMEM14DP-201ENST00000422205 345 ntBASIC16.15■□□□□ 0.18
O00370 GSAP-205ENST00000430584 600 ntTSL 5 BASIC16.15■□□□□ 0.18
O00370 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
O00370 AC068587.3-201ENST00000526613 355 ntBASIC16.15■□□□□ 0.18
O00370 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
O00370 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
O00370 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC16.15■□□□□ 0.18
O00370 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC16.15■□□□□ 0.18
O00370 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
O00370 AC139749.1-202ENST00000617529 3139 ntBASIC16.15■□□□□ 0.18
O00370 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
O00370 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
O00370 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC16.15■□□□□ 0.18
O00370 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
O00370 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC16.15■□□□□ 0.18
O00370 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
O00370 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC16.15■□□□□ 0.18
O00370 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
O00370 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC16.15■□□□□ 0.18
O00370 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
O00370 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
O00370 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
O00370 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
O00370 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
O00370 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.18
O00370 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
O00370 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC16.14■□□□□ 0.18
O00370 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC16.14■□□□□ 0.17
O00370 AL137783.1-201ENST00000623494 1896 ntBASIC16.14■□□□□ 0.17
O00370 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC16.14■□□□□ 0.17
O00370 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
O00370 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
O00370 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
O00370 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
O00370 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
O00370 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
O00370 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
O00370 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC16.14■□□□□ 0.17
O00370 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
O00370 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
O00370 RPS15-201ENST00000233609 534 ntTSL 2 BASIC16.14■□□□□ 0.17
O00370 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC16.14■□□□□ 0.17
O00370 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC16.14■□□□□ 0.17
O00370 TTTY23B-201ENST00000442790 549 ntBASIC16.14■□□□□ 0.17
O00370 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC16.14■□□□□ 0.17
O00370 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC16.14■□□□□ 0.17
O00370 USP32P1-208ENST00000506594 1164 ntBASIC16.14■□□□□ 0.17
O00370 PTP4A1P2-201ENST00000546033 454 ntBASIC16.14■□□□□ 0.17
O00370 CR383656.12-201ENST00000549567 513 ntBASIC16.14■□□□□ 0.17
O00370 RPS15-205ENST00000586686 562 ntTSL 5 BASIC16.14■□□□□ 0.17
O00370 RPS15-208ENST00000591804 711 ntTSL 5 BASIC16.14■□□□□ 0.17
O00370 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
O00370 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC16.14■□□□□ 0.17
O00370 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
O00370 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
O00370 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
O00370 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
O00370 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC16.14■□□□□ 0.17
O00370 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
O00370 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
O00370 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC16.14■□□□□ 0.17
O00370 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
O00370 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
O00370 KRT8P35-201ENST00000483942 1338 ntBASIC16.14■□□□□ 0.17
O00370 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
O00370 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
O00370 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
O00370 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
O00370 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
O00370 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC16.14■□□□□ 0.17
O00370 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
O00370 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
O00370 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 60.5 ms