Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
SRRM4A7MD48 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
SRRM4A7MD48 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
SRRM4A7MD48 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC12.21□□□□□ -0.45
SRRM4A7MD48 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
SRRM4A7MD48 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
SRRM4A7MD48 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
SRRM4A7MD48 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
SRRM4A7MD48 METTL26-204ENST00000397665 558 ntTSL 2 BASIC12.21□□□□□ -0.45
SRRM4A7MD48 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
SRRM4A7MD48 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC12.21□□□□□ -0.45
SRRM4A7MD48 RPL13AP25-201ENST00000484130 612 ntBASIC12.21□□□□□ -0.45
SRRM4A7MD48 INGX-202ENST00000489074 768 ntBASIC12.21□□□□□ -0.45
SRRM4A7MD48 RNA5SP421-201ENST00000516864 134 ntBASIC12.21□□□□□ -0.45
SRRM4A7MD48 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
SRRM4A7MD48 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
SRRM4A7MD48 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC12.21□□□□□ -0.45
SRRM4A7MD48 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC12.21□□□□□ -0.45
SRRM4A7MD48 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
SRRM4A7MD48 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC12.21□□□□□ -0.45
SRRM4A7MD48 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
SRRM4A7MD48 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC12.21□□□□□ -0.45
SRRM4A7MD48 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
SRRM4A7MD48 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
SRRM4A7MD48 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
SRRM4A7MD48 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC12.21□□□□□ -0.46
SRRM4A7MD48 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
SRRM4A7MD48 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
SRRM4A7MD48 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
SRRM4A7MD48 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC12.21□□□□□ -0.46
SRRM4A7MD48 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC12.21□□□□□ -0.46
SRRM4A7MD48 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC12.21□□□□□ -0.46
SRRM4A7MD48 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC12.21□□□□□ -0.46
SRRM4A7MD48 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
SRRM4A7MD48 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
SRRM4A7MD48 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.46
SRRM4A7MD48 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
SRRM4A7MD48 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
SRRM4A7MD48 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SRRM4A7MD48 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SRRM4A7MD48 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC12.2□□□□□ -0.46
SRRM4A7MD48 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SRRM4A7MD48 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
SRRM4A7MD48 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SRRM4A7MD48 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC12.2□□□□□ -0.46
SRRM4A7MD48 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
SRRM4A7MD48 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
SRRM4A7MD48 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SRRM4A7MD48 SLC7A15P-201ENST00000424028 1363 ntBASIC12.2□□□□□ -0.46
SRRM4A7MD48 TDG-209ENST00000544861 1387 ntTSL 2 BASIC12.2□□□□□ -0.46
SRRM4A7MD48 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
SRRM4A7MD48 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC12.2□□□□□ -0.46
SRRM4A7MD48 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
SRRM4A7MD48 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC12.2□□□□□ -0.46
SRRM4A7MD48 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC12.2□□□□□ -0.46
SRRM4A7MD48 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
SRRM4A7MD48 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SRRM4A7MD48 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
SRRM4A7MD48 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC12.2□□□□□ -0.46
SRRM4A7MD48 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
SRRM4A7MD48 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
SRRM4A7MD48 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SRRM4A7MD48 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
SRRM4A7MD48 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC12.2□□□□□ -0.46
SRRM4A7MD48 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
SRRM4A7MD48 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC12.2□□□□□ -0.46
SRRM4A7MD48 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
SRRM4A7MD48 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
SRRM4A7MD48 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
SRRM4A7MD48 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC12.2□□□□□ -0.46
SRRM4A7MD48 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
SRRM4A7MD48 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
SRRM4A7MD48 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
SRRM4A7MD48 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC12.2□□□□□ -0.46
SRRM4A7MD48 SPTLC1P1-201ENST00000447199 261 ntBASIC12.2□□□□□ -0.46
SRRM4A7MD48 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
SRRM4A7MD48 AC093004.1-201ENST00000508850 424 ntBASIC12.2□□□□□ -0.46
SRRM4A7MD48 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
SRRM4A7MD48 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SRRM4A7MD48 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC12.2□□□□□ -0.46
SRRM4A7MD48 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC12.2□□□□□ -0.46
SRRM4A7MD48 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
SRRM4A7MD48 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC12.2□□□□□ -0.46
SRRM4A7MD48 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC12.2□□□□□ -0.46
SRRM4A7MD48 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC12.2□□□□□ -0.46
SRRM4A7MD48 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC12.2□□□□□ -0.46
SRRM4A7MD48 PRSS30P-206ENST00000641773 873 ntBASIC12.2□□□□□ -0.46
SRRM4A7MD48 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
SRRM4A7MD48 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC12.2□□□□□ -0.46
SRRM4A7MD48 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
SRRM4A7MD48 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SRRM4A7MD48 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SRRM4A7MD48 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC12.2□□□□□ -0.46
SRRM4A7MD48 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SRRM4A7MD48 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
SRRM4A7MD48 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC12.2□□□□□ -0.46
SRRM4A7MD48 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC12.2□□□□□ -0.46
SRRM4A7MD48 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
SRRM4A7MD48 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC12.2□□□□□ -0.46
SRRM4A7MD48 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms