Protein–RNA interactions for Protein: A3KN83

SBNO1, Protein strawberry notch homolog 1, humanhuman

Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SBNO1A3KN83 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
SBNO1A3KN83 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC20.1■□□□□ 0.81
SBNO1A3KN83 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SBNO1A3KN83 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SBNO1A3KN83 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC20.1■□□□□ 0.81
SBNO1A3KN83 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC20.1■□□□□ 0.81
SBNO1A3KN83 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC20.1■□□□□ 0.81
SBNO1A3KN83 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
SBNO1A3KN83 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC20.1■□□□□ 0.81
SBNO1A3KN83 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
SBNO1A3KN83 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SBNO1A3KN83 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SBNO1A3KN83 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SBNO1A3KN83 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
SBNO1A3KN83 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SBNO1A3KN83 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SBNO1A3KN83 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC20.1■□□□□ 0.81
SBNO1A3KN83 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
SBNO1A3KN83 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC20.1■□□□□ 0.81
SBNO1A3KN83 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SBNO1A3KN83 SLC44A3-209ENST00000532427 1912 ntTSL 2 BASIC20.1■□□□□ 0.81
SBNO1A3KN83 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC20.1■□□□□ 0.81
SBNO1A3KN83 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SBNO1A3KN83 AL357563.1-201ENST00000404728 395 ntBASIC20.09■□□□□ 0.81
SBNO1A3KN83 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SBNO1A3KN83 HIST2H2BA-201ENST00000412169 381 ntBASIC20.09■□□□□ 0.81
SBNO1A3KN83 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC20.09■□□□□ 0.81
SBNO1A3KN83 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC20.09■□□□□ 0.81
SBNO1A3KN83 PTPA-215ENST00000432124 567 ntTSL 4 BASIC20.09■□□□□ 0.81
SBNO1A3KN83 AL139008.1-201ENST00000437894 228 ntBASIC20.09■□□□□ 0.81
SBNO1A3KN83 Metazoa_SRP.100-201ENST00000447610 282 ntBASIC20.09■□□□□ 0.81
SBNO1A3KN83 ALG1L6P-201ENST00000515248 758 ntBASIC20.09■□□□□ 0.81
SBNO1A3KN83 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC20.09■□□□□ 0.81
SBNO1A3KN83 NUDT4P2-201ENST00000578341 546 ntBASIC20.09■□□□□ 0.81
SBNO1A3KN83 FAM104A-204ENST00000580032 451 ntTSL 3 BASIC20.09■□□□□ 0.81
SBNO1A3KN83 AC145207.8-201ENST00000580897 563 ntTSL 4 BASIC20.09■□□□□ 0.81
SBNO1A3KN83 AC107464.3-201ENST00000609172 737 ntBASIC20.09■□□□□ 0.81
SBNO1A3KN83 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SBNO1A3KN83 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SBNO1A3KN83 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SBNO1A3KN83 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SBNO1A3KN83 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SBNO1A3KN83 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SBNO1A3KN83 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC20.09■□□□□ 0.81
SBNO1A3KN83 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SBNO1A3KN83 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC20.09■□□□□ 0.81
SBNO1A3KN83 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SBNO1A3KN83 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SBNO1A3KN83 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SBNO1A3KN83 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC20.09■□□□□ 0.81
SBNO1A3KN83 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC20.09■□□□□ 0.81
SBNO1A3KN83 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SBNO1A3KN83 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC20.09■□□□□ 0.81
SBNO1A3KN83 FAM168A-204ENST00000450446 1364 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SBNO1A3KN83 SERPINB9P1-202ENST00000545177 1375 ntTSL 3 BASIC20.09■□□□□ 0.81
SBNO1A3KN83 AC012442.2-201ENST00000414784 425 ntTSL 2 BASIC20.08■□□□□ 0.81
SBNO1A3KN83 LINC01868-201ENST00000414965 562 ntTSL 4 BASIC20.08■□□□□ 0.81
SBNO1A3KN83 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC20.08■□□□□ 0.81
SBNO1A3KN83 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC20.08■□□□□ 0.81
SBNO1A3KN83 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
SBNO1A3KN83 AC007326.1-201ENST00000604539 458 ntBASIC20.08■□□□□ 0.81
SBNO1A3KN83 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
SBNO1A3KN83 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC20.08■□□□□ 0.81
SBNO1A3KN83 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC20.08■□□□□ 0.81
SBNO1A3KN83 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
SBNO1A3KN83 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
SBNO1A3KN83 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
SBNO1A3KN83 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC20.08■□□□□ 0.81
SBNO1A3KN83 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SBNO1A3KN83 AC087481.3-201ENST00000602886 1894 ntBASIC20.08■□□□□ 0.81
SBNO1A3KN83 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SBNO1A3KN83 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SBNO1A3KN83 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.81
SBNO1A3KN83 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
SBNO1A3KN83 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
SBNO1A3KN83 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SBNO1A3KN83 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
SBNO1A3KN83 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
SBNO1A3KN83 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
SBNO1A3KN83 PCNA-202ENST00000379160 1359 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
SBNO1A3KN83 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
SBNO1A3KN83 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC20.08■□□□□ 0.8
SBNO1A3KN83 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC20.08■□□□□ 0.8
SBNO1A3KN83 TMPRSS3-202ENST00000398397 1342 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
SBNO1A3KN83 Z97652.1-201ENST00000415176 329 ntTSL 5 BASIC20.08■□□□□ 0.8
SBNO1A3KN83 AL157788.1-201ENST00000437838 229 ntTSL 3 BASIC20.08■□□□□ 0.8
SBNO1A3KN83 TP53AIP1-201ENST00000458238 777 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
SBNO1A3KN83 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC20.08■□□□□ 0.8
SBNO1A3KN83 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC20.08■□□□□ 0.8
SBNO1A3KN83 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SBNO1A3KN83 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SBNO1A3KN83 C18orf15-201ENST00000623680 2534 ntBASIC20.07■□□□□ 0.8
SBNO1A3KN83 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SBNO1A3KN83 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SBNO1A3KN83 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SBNO1A3KN83 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC20.07■□□□□ 0.8
SBNO1A3KN83 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SBNO1A3KN83 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC20.07■□□□□ 0.8
SBNO1A3KN83 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SBNO1A3KN83 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms