Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
TCRBV3S1A0A5B6 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TCRBV3S1A0A5B6 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
TCRBV3S1A0A5B6 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TCRBV3S1A0A5B6 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
TCRBV3S1A0A5B6 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TCRBV3S1A0A5B6 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC14.17□□□□□ -0.14
TCRBV3S1A0A5B6 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TCRBV3S1A0A5B6 BEX3-201ENST00000361298 921 ntTSL 2 BASIC14.17□□□□□ -0.14
TCRBV3S1A0A5B6 NEK7-201ENST00000367383 586 ntTSL 2 BASIC14.17□□□□□ -0.14
TCRBV3S1A0A5B6 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TCRBV3S1A0A5B6 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
TCRBV3S1A0A5B6 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TCRBV3S1A0A5B6 RPL13P2-201ENST00000440687 659 ntBASIC14.17□□□□□ -0.14
TCRBV3S1A0A5B6 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
TCRBV3S1A0A5B6 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC14.17□□□□□ -0.14
TCRBV3S1A0A5B6 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC14.17□□□□□ -0.14
TCRBV3S1A0A5B6 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
TCRBV3S1A0A5B6 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC14.17□□□□□ -0.14
TCRBV3S1A0A5B6 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
TCRBV3S1A0A5B6 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC14.17□□□□□ -0.14
TCRBV3S1A0A5B6 AC104692.2-201ENST00000603054 253 ntBASIC14.17□□□□□ -0.14
TCRBV3S1A0A5B6 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TCRBV3S1A0A5B6 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
TCRBV3S1A0A5B6 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
TCRBV3S1A0A5B6 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC14.17□□□□□ -0.14
TCRBV3S1A0A5B6 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
TCRBV3S1A0A5B6 MOG-221ENST00000376917 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
TCRBV3S1A0A5B6 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC14.17□□□□□ -0.14
TCRBV3S1A0A5B6 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
TCRBV3S1A0A5B6 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TCRBV3S1A0A5B6 ALAS1-204ENST00000469224 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TCRBV3S1A0A5B6 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC14.17□□□□□ -0.14
TCRBV3S1A0A5B6 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TCRBV3S1A0A5B6 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TCRBV3S1A0A5B6 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TCRBV3S1A0A5B6 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC14.16□□□□□ -0.14
TCRBV3S1A0A5B6 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
TCRBV3S1A0A5B6 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC14.16□□□□□ -0.14
TCRBV3S1A0A5B6 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TCRBV3S1A0A5B6 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TCRBV3S1A0A5B6 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TCRBV3S1A0A5B6 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TCRBV3S1A0A5B6 RPS19-201ENST00000221975 500 ntTSL 3 BASIC14.16□□□□□ -0.14
TCRBV3S1A0A5B6 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
TCRBV3S1A0A5B6 ACP7-201ENST00000331256 2966 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
TCRBV3S1A0A5B6 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC14.16□□□□□ -0.14
TCRBV3S1A0A5B6 TOMM22P5-201ENST00000416399 439 ntBASIC14.16□□□□□ -0.14
TCRBV3S1A0A5B6 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC14.16□□□□□ -0.14
TCRBV3S1A0A5B6 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC14.16□□□□□ -0.14
TCRBV3S1A0A5B6 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC14.16□□□□□ -0.14
TCRBV3S1A0A5B6 AC069335.1-201ENST00000489972 472 ntBASIC14.16□□□□□ -0.14
TCRBV3S1A0A5B6 NT5C-211ENST00000582170 653 ntTSL 3 BASIC14.16□□□□□ -0.14
TCRBV3S1A0A5B6 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC14.16□□□□□ -0.14
TCRBV3S1A0A5B6 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
TCRBV3S1A0A5B6 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC14.16□□□□□ -0.14
TCRBV3S1A0A5B6 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC14.16□□□□□ -0.14
TCRBV3S1A0A5B6 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC14.16□□□□□ -0.14
TCRBV3S1A0A5B6 AF228730.6-201ENST00000641497 218 ntBASIC14.16□□□□□ -0.14
TCRBV3S1A0A5B6 AC084121.3-201ENST00000641716 218 ntBASIC14.16□□□□□ -0.14
TCRBV3S1A0A5B6 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
TCRBV3S1A0A5B6 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
TCRBV3S1A0A5B6 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
TCRBV3S1A0A5B6 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TCRBV3S1A0A5B6 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC14.16□□□□□ -0.14
TCRBV3S1A0A5B6 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TCRBV3S1A0A5B6 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
TCRBV3S1A0A5B6 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
TCRBV3S1A0A5B6 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC14.16□□□□□ -0.14
TCRBV3S1A0A5B6 AC114271.1-201ENST00000612689 2813 ntBASIC14.16□□□□□ -0.14
TCRBV3S1A0A5B6 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TCRBV3S1A0A5B6 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TCRBV3S1A0A5B6 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC14.16□□□□□ -0.14
TCRBV3S1A0A5B6 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC14.16□□□□□ -0.14
TCRBV3S1A0A5B6 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
TCRBV3S1A0A5B6 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TCRBV3S1A0A5B6 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC14.16□□□□□ -0.14
TCRBV3S1A0A5B6 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TCRBV3S1A0A5B6 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC14.16□□□□□ -0.14
TCRBV3S1A0A5B6 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC14.16□□□□□ -0.14
TCRBV3S1A0A5B6 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
TCRBV3S1A0A5B6 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
TCRBV3S1A0A5B6 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TCRBV3S1A0A5B6 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC14.16□□□□□ -0.14
TCRBV3S1A0A5B6 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TCRBV3S1A0A5B6 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
TCRBV3S1A0A5B6 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
TCRBV3S1A0A5B6 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC14.15□□□□□ -0.14
TCRBV3S1A0A5B6 RGS9-210ENST00000635833 2308 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
TCRBV3S1A0A5B6 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TCRBV3S1A0A5B6 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TCRBV3S1A0A5B6 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC14.15□□□□□ -0.14
TCRBV3S1A0A5B6 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC14.15□□□□□ -0.14
TCRBV3S1A0A5B6 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC14.15□□□□□ -0.14
TCRBV3S1A0A5B6 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TCRBV3S1A0A5B6 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TCRBV3S1A0A5B6 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
TCRBV3S1A0A5B6 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
TCRBV3S1A0A5B6 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TCRBV3S1A0A5B6 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms