Protein–RNA interactions for Protein: A0A1B0GX56

TRDV1, T-cell receptor delta variable 1 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRDV1A0A1B0GX56 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRDV1A0A1B0GX56 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
TRDV1A0A1B0GX56 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC13.34□□□□□ -0.27
TRDV1A0A1B0GX56 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRDV1A0A1B0GX56 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRDV1A0A1B0GX56 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC13.34□□□□□ -0.27
TRDV1A0A1B0GX56 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
TRDV1A0A1B0GX56 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRDV1A0A1B0GX56 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
TRDV1A0A1B0GX56 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC13.34□□□□□ -0.27
TRDV1A0A1B0GX56 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
TRDV1A0A1B0GX56 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
TRDV1A0A1B0GX56 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC13.34□□□□□ -0.27
TRDV1A0A1B0GX56 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRDV1A0A1B0GX56 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC13.34□□□□□ -0.27
TRDV1A0A1B0GX56 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
TRDV1A0A1B0GX56 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TRDV1A0A1B0GX56 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
TRDV1A0A1B0GX56 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC13.34□□□□□ -0.27
TRDV1A0A1B0GX56 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC13.33□□□□□ -0.27
TRDV1A0A1B0GX56 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.27
TRDV1A0A1B0GX56 AC073548.1-201ENST00000624088 1882 ntBASIC13.33□□□□□ -0.27
TRDV1A0A1B0GX56 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC13.33□□□□□ -0.27
TRDV1A0A1B0GX56 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
TRDV1A0A1B0GX56 NIN-202ENST00000324330 4364 ntTSL 5 BASIC13.33□□□□□ -0.28
TRDV1A0A1B0GX56 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
TRDV1A0A1B0GX56 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRDV1A0A1B0GX56 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC13.33□□□□□ -0.28
TRDV1A0A1B0GX56 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRDV1A0A1B0GX56 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
TRDV1A0A1B0GX56 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRDV1A0A1B0GX56 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
TRDV1A0A1B0GX56 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
TRDV1A0A1B0GX56 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC13.33□□□□□ -0.28
TRDV1A0A1B0GX56 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC13.33□□□□□ -0.28
TRDV1A0A1B0GX56 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC13.33□□□□□ -0.28
TRDV1A0A1B0GX56 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC13.33□□□□□ -0.28
TRDV1A0A1B0GX56 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
TRDV1A0A1B0GX56 BANF1P1-201ENST00000553684 263 ntBASIC13.33□□□□□ -0.28
TRDV1A0A1B0GX56 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC13.33□□□□□ -0.28
TRDV1A0A1B0GX56 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC13.33□□□□□ -0.28
TRDV1A0A1B0GX56 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC13.33□□□□□ -0.28
TRDV1A0A1B0GX56 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
TRDV1A0A1B0GX56 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRDV1A0A1B0GX56 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
TRDV1A0A1B0GX56 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC13.33□□□□□ -0.28
TRDV1A0A1B0GX56 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRDV1A0A1B0GX56 CYP2AB1P-202ENST00000454440 1456 ntBASIC13.33□□□□□ -0.28
TRDV1A0A1B0GX56 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRDV1A0A1B0GX56 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRDV1A0A1B0GX56 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
TRDV1A0A1B0GX56 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRDV1A0A1B0GX56 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
TRDV1A0A1B0GX56 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC13.33□□□□□ -0.28
TRDV1A0A1B0GX56 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC13.33□□□□□ -0.28
TRDV1A0A1B0GX56 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC13.33□□□□□ -0.28
TRDV1A0A1B0GX56 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
TRDV1A0A1B0GX56 AC138969.2-201ENST00000532739 9932 ntBASIC13.33□□□□□ -0.28
TRDV1A0A1B0GX56 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRDV1A0A1B0GX56 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
TRDV1A0A1B0GX56 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRDV1A0A1B0GX56 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRDV1A0A1B0GX56 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.28
TRDV1A0A1B0GX56 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC13.33□□□□□ -0.28
TRDV1A0A1B0GX56 PES1-204ENST00000402284 2144 ntTSL 5 BASIC13.33□□□□□ -0.28
TRDV1A0A1B0GX56 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC13.33□□□□□ -0.28
TRDV1A0A1B0GX56 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
TRDV1A0A1B0GX56 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
TRDV1A0A1B0GX56 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TRDV1A0A1B0GX56 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TRDV1A0A1B0GX56 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC13.32□□□□□ -0.28
TRDV1A0A1B0GX56 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TRDV1A0A1B0GX56 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TRDV1A0A1B0GX56 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC13.32□□□□□ -0.28
TRDV1A0A1B0GX56 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TRDV1A0A1B0GX56 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TRDV1A0A1B0GX56 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC13.32□□□□□ -0.28
TRDV1A0A1B0GX56 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TRDV1A0A1B0GX56 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRDV1A0A1B0GX56 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC13.32□□□□□ -0.28
TRDV1A0A1B0GX56 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRDV1A0A1B0GX56 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TRDV1A0A1B0GX56 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC13.32□□□□□ -0.28
TRDV1A0A1B0GX56 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRDV1A0A1B0GX56 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC13.32□□□□□ -0.28
TRDV1A0A1B0GX56 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRDV1A0A1B0GX56 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRDV1A0A1B0GX56 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRDV1A0A1B0GX56 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC13.32□□□□□ -0.28
TRDV1A0A1B0GX56 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TRDV1A0A1B0GX56 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRDV1A0A1B0GX56 AC012617.1-204ENST00000586340 2305 ntBASIC13.32□□□□□ -0.28
TRDV1A0A1B0GX56 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
TRDV1A0A1B0GX56 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
TRDV1A0A1B0GX56 ADH5P3-201ENST00000433842 1137 ntBASIC13.32□□□□□ -0.28
TRDV1A0A1B0GX56 KRT18P64-201ENST00000434946 1219 ntBASIC13.32□□□□□ -0.28
TRDV1A0A1B0GX56 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC13.32□□□□□ -0.28
TRDV1A0A1B0GX56 AC079781.3-201ENST00000449110 356 ntBASIC13.32□□□□□ -0.28
TRDV1A0A1B0GX56 SPDYE11-202ENST00000450699 704 ntBASIC13.32□□□□□ -0.28
TRDV1A0A1B0GX56 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC13.32□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 107.9 ms