Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC11.49□□□□□ -0.57
HLA-DRB4X5D2U9 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
HLA-DRB4X5D2U9 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
HLA-DRB4X5D2U9 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC11.48□□□□□ -0.57
HLA-DRB4X5D2U9 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC11.48□□□□□ -0.57
HLA-DRB4X5D2U9 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
HLA-DRB4X5D2U9 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
HLA-DRB4X5D2U9 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC11.48□□□□□ -0.57
HLA-DRB4X5D2U9 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC11.48□□□□□ -0.57
HLA-DRB4X5D2U9 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
HLA-DRB4X5D2U9 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC11.48□□□□□ -0.57
HLA-DRB4X5D2U9 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
HLA-DRB4X5D2U9 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
HLA-DRB4X5D2U9 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
HLA-DRB4X5D2U9 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
HLA-DRB4X5D2U9 UCKL1-AS1-201ENST00000623569 3602 ntBASIC11.48□□□□□ -0.57
HLA-DRB4X5D2U9 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
HLA-DRB4X5D2U9 SPDYE19P-201ENST00000338590 713 ntBASIC11.48□□□□□ -0.57
HLA-DRB4X5D2U9 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
HLA-DRB4X5D2U9 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
HLA-DRB4X5D2U9 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
HLA-DRB4X5D2U9 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC11.48□□□□□ -0.57
HLA-DRB4X5D2U9 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
HLA-DRB4X5D2U9 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
HLA-DRB4X5D2U9 OSM-203ENST00000403463 464 ntTSL 3 BASIC11.48□□□□□ -0.57
HLA-DRB4X5D2U9 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
HLA-DRB4X5D2U9 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC11.48□□□□□ -0.57
HLA-DRB4X5D2U9 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC11.48□□□□□ -0.57
HLA-DRB4X5D2U9 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
HLA-DRB4X5D2U9 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC11.48□□□□□ -0.57
HLA-DRB4X5D2U9 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
HLA-DRB4X5D2U9 AC055876.2-201ENST00000531834 546 ntBASIC11.48□□□□□ -0.57
HLA-DRB4X5D2U9 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC11.48□□□□□ -0.57
HLA-DRB4X5D2U9 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
HLA-DRB4X5D2U9 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC11.48□□□□□ -0.57
HLA-DRB4X5D2U9 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC11.48□□□□□ -0.57
HLA-DRB4X5D2U9 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
HLA-DRB4X5D2U9 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC11.48□□□□□ -0.57
HLA-DRB4X5D2U9 HFE2-206ENST00000634927 506 ntTSL 4 BASIC11.48□□□□□ -0.57
HLA-DRB4X5D2U9 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC11.48□□□□□ -0.57
HLA-DRB4X5D2U9 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
HLA-DRB4X5D2U9 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC11.48□□□□□ -0.57
HLA-DRB4X5D2U9 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC11.48□□□□□ -0.57
HLA-DRB4X5D2U9 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
HLA-DRB4X5D2U9 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
HLA-DRB4X5D2U9 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
HLA-DRB4X5D2U9 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
HLA-DRB4X5D2U9 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
HLA-DRB4X5D2U9 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
HLA-DRB4X5D2U9 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
HLA-DRB4X5D2U9 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
HLA-DRB4X5D2U9 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
HLA-DRB4X5D2U9 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
HLA-DRB4X5D2U9 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
HLA-DRB4X5D2U9 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
HLA-DRB4X5D2U9 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
HLA-DRB4X5D2U9 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
HLA-DRB4X5D2U9 DKFZP434A062-201ENST00000573103 5021 ntBASIC11.48□□□□□ -0.57
HLA-DRB4X5D2U9 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
HLA-DRB4X5D2U9 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
HLA-DRB4X5D2U9 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC11.47□□□□□ -0.57
HLA-DRB4X5D2U9 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
HLA-DRB4X5D2U9 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
HLA-DRB4X5D2U9 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
HLA-DRB4X5D2U9 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
HLA-DRB4X5D2U9 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
HLA-DRB4X5D2U9 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC11.47□□□□□ -0.57
HLA-DRB4X5D2U9 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
HLA-DRB4X5D2U9 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC11.47□□□□□ -0.57
HLA-DRB4X5D2U9 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
HLA-DRB4X5D2U9 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
HLA-DRB4X5D2U9 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
HLA-DRB4X5D2U9 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
HLA-DRB4X5D2U9 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
HLA-DRB4X5D2U9 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC11.47□□□□□ -0.57
HLA-DRB4X5D2U9 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
HLA-DRB4X5D2U9 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
HLA-DRB4X5D2U9 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
HLA-DRB4X5D2U9 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
HLA-DRB4X5D2U9 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC11.47□□□□□ -0.57
HLA-DRB4X5D2U9 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC11.47□□□□□ -0.57
HLA-DRB4X5D2U9 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC11.47□□□□□ -0.57
HLA-DRB4X5D2U9 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
HLA-DRB4X5D2U9 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
HLA-DRB4X5D2U9 WASH3P-207ENST00000560956 1394 ntBASIC11.47□□□□□ -0.57
HLA-DRB4X5D2U9 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
HLA-DRB4X5D2U9 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
HLA-DRB4X5D2U9 SUN1-204ENST00000403868 978 ntTSL 2 BASIC11.47□□□□□ -0.57
HLA-DRB4X5D2U9 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC11.47□□□□□ -0.57
HLA-DRB4X5D2U9 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
HLA-DRB4X5D2U9 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
HLA-DRB4X5D2U9 RPL13AP25-201ENST00000484130 612 ntBASIC11.47□□□□□ -0.57
HLA-DRB4X5D2U9 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
HLA-DRB4X5D2U9 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC11.47□□□□□ -0.57
HLA-DRB4X5D2U9 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC11.47□□□□□ -0.57
HLA-DRB4X5D2U9 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC11.47□□□□□ -0.57
HLA-DRB4X5D2U9 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC11.47□□□□□ -0.57
HLA-DRB4X5D2U9 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
HLA-DRB4X5D2U9 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC11.47□□□□□ -0.57
HLA-DRB4X5D2U9 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC11.47□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms