Protein–RNA interactions for Protein: Q9Y2L9

LRCH1, Leucine-rich repeat and calponin homology domain-containing protein 1, humanhuman

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1Q9Y2L9 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
LRCH1Q9Y2L9 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
LRCH1Q9Y2L9 CAMSAP3-201ENST00000160298 3889 ntAPPRIS P3 TSL 2 BASIC14.48□□□□□ -0.09
LRCH1Q9Y2L9 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC14.48□□□□□ -0.09
LRCH1Q9Y2L9 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC14.48□□□□□ -0.09
LRCH1Q9Y2L9 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC14.48□□□□□ -0.09
LRCH1Q9Y2L9 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC14.48□□□□□ -0.09
LRCH1Q9Y2L9 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
LRCH1Q9Y2L9 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC14.48□□□□□ -0.09
LRCH1Q9Y2L9 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC14.48□□□□□ -0.09
LRCH1Q9Y2L9 GHSR-202ENST00000427970 912 ntBASIC14.48□□□□□ -0.09
LRCH1Q9Y2L9 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC14.48□□□□□ -0.09
LRCH1Q9Y2L9 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC14.48□□□□□ -0.09
LRCH1Q9Y2L9 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC14.48□□□□□ -0.09
LRCH1Q9Y2L9 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
LRCH1Q9Y2L9 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC14.48□□□□□ -0.09
LRCH1Q9Y2L9 ETFA-208ENST00000559602 792 ntTSL 3 BASIC14.48□□□□□ -0.09
LRCH1Q9Y2L9 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC14.48□□□□□ -0.09
LRCH1Q9Y2L9 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
LRCH1Q9Y2L9 SH2D3C-201ENST00000314830 3124 ntAPPRIS P4 TSL 1 (best) BASIC14.48□□□□□ -0.09
LRCH1Q9Y2L9 RAB40A-202ENST00000372633 3126 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
LRCH1Q9Y2L9 ABR-205ENST00000544583 5595 ntTSL 2 BASIC14.48□□□□□ -0.09
LRCH1Q9Y2L9 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC14.48□□□□□ -0.09
LRCH1Q9Y2L9 MAP7-201ENST00000354570 4152 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
LRCH1Q9Y2L9 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC14.48□□□□□ -0.09
LRCH1Q9Y2L9 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
LRCH1Q9Y2L9 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
LRCH1Q9Y2L9 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LRCH1Q9Y2L9 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC14.48□□□□□ -0.09
LRCH1Q9Y2L9 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LRCH1Q9Y2L9 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
LRCH1Q9Y2L9 ZNF259P1-201ENST00000407656 1365 ntBASIC14.47□□□□□ -0.09
LRCH1Q9Y2L9 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
LRCH1Q9Y2L9 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC14.47□□□□□ -0.09
LRCH1Q9Y2L9 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LRCH1Q9Y2L9 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
LRCH1Q9Y2L9 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LRCH1Q9Y2L9 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
LRCH1Q9Y2L9 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC14.47□□□□□ -0.09
LRCH1Q9Y2L9 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC14.47□□□□□ -0.09
LRCH1Q9Y2L9 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
LRCH1Q9Y2L9 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LRCH1Q9Y2L9 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LRCH1Q9Y2L9 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
LRCH1Q9Y2L9 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC14.47□□□□□ -0.09
LRCH1Q9Y2L9 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
LRCH1Q9Y2L9 FUK-202ENST00000378912 3925 ntTSL 2 BASIC14.47□□□□□ -0.09
LRCH1Q9Y2L9 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC14.47□□□□□ -0.09
LRCH1Q9Y2L9 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
LRCH1Q9Y2L9 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
LRCH1Q9Y2L9 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC14.47□□□□□ -0.09
LRCH1Q9Y2L9 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC14.47□□□□□ -0.09
LRCH1Q9Y2L9 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC14.47□□□□□ -0.09
LRCH1Q9Y2L9 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
LRCH1Q9Y2L9 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
LRCH1Q9Y2L9 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC14.47□□□□□ -0.09
LRCH1Q9Y2L9 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC14.47□□□□□ -0.09
LRCH1Q9Y2L9 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC14.47□□□□□ -0.09
LRCH1Q9Y2L9 AC092910.1-201ENST00000482027 1129 ntBASIC14.47□□□□□ -0.09
LRCH1Q9Y2L9 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC14.47□□□□□ -0.09
LRCH1Q9Y2L9 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC14.47□□□□□ -0.09
LRCH1Q9Y2L9 AC243562.2-201ENST00000561247 970 ntBASIC14.47□□□□□ -0.09
LRCH1Q9Y2L9 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC14.47□□□□□ -0.09
LRCH1Q9Y2L9 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
LRCH1Q9Y2L9 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC14.47□□□□□ -0.09
LRCH1Q9Y2L9 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC14.47□□□□□ -0.09
LRCH1Q9Y2L9 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
LRCH1Q9Y2L9 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
LRCH1Q9Y2L9 SLC16A1-201ENST00000369626 3910 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LRCH1Q9Y2L9 TXNDC12-201ENST00000371626 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LRCH1Q9Y2L9 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
LRCH1Q9Y2L9 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
LRCH1Q9Y2L9 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
LRCH1Q9Y2L9 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
LRCH1Q9Y2L9 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
LRCH1Q9Y2L9 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
LRCH1Q9Y2L9 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
LRCH1Q9Y2L9 LINC01833-203ENST00000437916 2880 ntTSL 3 BASIC14.47□□□□□ -0.09
LRCH1Q9Y2L9 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
LRCH1Q9Y2L9 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
LRCH1Q9Y2L9 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
LRCH1Q9Y2L9 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC14.47□□□□□ -0.09
LRCH1Q9Y2L9 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC14.46□□□□□ -0.09
LRCH1Q9Y2L9 CETP-203ENST00000566128 1733 ntTSL 5 BASIC14.46□□□□□ -0.09
LRCH1Q9Y2L9 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
LRCH1Q9Y2L9 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC14.46□□□□□ -0.09
LRCH1Q9Y2L9 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC14.46□□□□□ -0.09
LRCH1Q9Y2L9 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
LRCH1Q9Y2L9 MAP7-202ENST00000432797 4375 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
LRCH1Q9Y2L9 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
LRCH1Q9Y2L9 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC14.46□□□□□ -0.09
LRCH1Q9Y2L9 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
LRCH1Q9Y2L9 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LRCH1Q9Y2L9 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LRCH1Q9Y2L9 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC14.46□□□□□ -0.09
LRCH1Q9Y2L9 IL21R-204ENST00000564089 3009 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
LRCH1Q9Y2L9 CTBP1-AS-201ENST00000625256 3886 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
LRCH1Q9Y2L9 PCDHB18P-202ENST00000526308 3197 ntBASIC14.46□□□□□ -0.09
LRCH1Q9Y2L9 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LRCH1Q9Y2L9 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms