Protein–RNA interactions for Protein: Q9Y2A7

NCKAP1, Nck-associated protein 1, humanhuman

Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1Q9Y2A7 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC15.18■□□□□ 0.02
NCKAP1Q9Y2A7 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC15.18■□□□□ 0.02
NCKAP1Q9Y2A7 AL360270.3-201ENST00000609118 1348 ntBASIC15.17■□□□□ 0.02
NCKAP1Q9Y2A7 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
NCKAP1Q9Y2A7 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
NCKAP1Q9Y2A7 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC15.17■□□□□ 0.02
NCKAP1Q9Y2A7 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
NCKAP1Q9Y2A7 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NCKAP1Q9Y2A7 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NCKAP1Q9Y2A7 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NCKAP1Q9Y2A7 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
NCKAP1Q9Y2A7 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NCKAP1Q9Y2A7 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC15.17■□□□□ 0.02
NCKAP1Q9Y2A7 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
NCKAP1Q9Y2A7 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC15.17■□□□□ 0.02
NCKAP1Q9Y2A7 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC15.17■□□□□ 0.02
NCKAP1Q9Y2A7 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
NCKAP1Q9Y2A7 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
NCKAP1Q9Y2A7 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC15.17■□□□□ 0.02
NCKAP1Q9Y2A7 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NCKAP1Q9Y2A7 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NCKAP1Q9Y2A7 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
NCKAP1Q9Y2A7 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC15.17■□□□□ 0.02
NCKAP1Q9Y2A7 HLA-K-203ENST00000430151 1046 ntBASIC15.17■□□□□ 0.02
NCKAP1Q9Y2A7 CALR4P-201ENST00000431943 946 ntBASIC15.17■□□□□ 0.02
NCKAP1Q9Y2A7 HSPB1P2-201ENST00000448722 546 ntBASIC15.17■□□□□ 0.02
NCKAP1Q9Y2A7 AKR7A2P1-201ENST00000460134 915 ntBASIC15.17■□□□□ 0.02
NCKAP1Q9Y2A7 AC091804.1-201ENST00000486888 567 ntBASIC15.17■□□□□ 0.02
NCKAP1Q9Y2A7 ZNF767P-206ENST00000513792 565 ntBASIC15.17■□□□□ 0.02
NCKAP1Q9Y2A7 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC15.17■□□□□ 0.02
NCKAP1Q9Y2A7 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
NCKAP1Q9Y2A7 AC106820.3-201ENST00000561653 397 ntBASIC15.17■□□□□ 0.02
NCKAP1Q9Y2A7 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC15.17■□□□□ 0.02
NCKAP1Q9Y2A7 AL606495.2-201ENST00000605867 535 ntBASIC15.17■□□□□ 0.02
NCKAP1Q9Y2A7 AC138466.3-201ENST00000619983 221 ntBASIC15.17■□□□□ 0.02
NCKAP1Q9Y2A7 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NCKAP1Q9Y2A7 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC15.17■□□□□ 0.02
NCKAP1Q9Y2A7 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC15.17■□□□□ 0.02
NCKAP1Q9Y2A7 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
NCKAP1Q9Y2A7 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NCKAP1Q9Y2A7 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
NCKAP1Q9Y2A7 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NCKAP1Q9Y2A7 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NCKAP1Q9Y2A7 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC15.17■□□□□ 0.02
NCKAP1Q9Y2A7 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC15.17■□□□□ 0.02
NCKAP1Q9Y2A7 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
NCKAP1Q9Y2A7 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
NCKAP1Q9Y2A7 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
NCKAP1Q9Y2A7 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
NCKAP1Q9Y2A7 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NCKAP1Q9Y2A7 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
NCKAP1Q9Y2A7 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
NCKAP1Q9Y2A7 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
NCKAP1Q9Y2A7 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC15.16■□□□□ 0.02
NCKAP1Q9Y2A7 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NCKAP1Q9Y2A7 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
NCKAP1Q9Y2A7 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
NCKAP1Q9Y2A7 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NCKAP1Q9Y2A7 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
NCKAP1Q9Y2A7 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
NCKAP1Q9Y2A7 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
NCKAP1Q9Y2A7 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NCKAP1Q9Y2A7 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
NCKAP1Q9Y2A7 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
NCKAP1Q9Y2A7 AC012508.2-201ENST00000567613 1472 ntBASIC15.16■□□□□ 0.02
NCKAP1Q9Y2A7 AC138028.6-201ENST00000616106 1482 ntBASIC15.16■□□□□ 0.02
NCKAP1Q9Y2A7 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC15.16■□□□□ 0.02
NCKAP1Q9Y2A7 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
NCKAP1Q9Y2A7 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
NCKAP1Q9Y2A7 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NCKAP1Q9Y2A7 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NCKAP1Q9Y2A7 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NCKAP1Q9Y2A7 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC15.16■□□□□ 0.02
NCKAP1Q9Y2A7 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
NCKAP1Q9Y2A7 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC15.16■□□□□ 0.02
NCKAP1Q9Y2A7 CSH2-202ENST00000345366 598 ntTSL 5 BASIC15.16■□□□□ 0.02
NCKAP1Q9Y2A7 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NCKAP1Q9Y2A7 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
NCKAP1Q9Y2A7 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC15.16■□□□□ 0.02
NCKAP1Q9Y2A7 HNRNPA1P32-201ENST00000396326 963 ntBASIC15.16■□□□□ 0.02
NCKAP1Q9Y2A7 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
NCKAP1Q9Y2A7 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
NCKAP1Q9Y2A7 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
NCKAP1Q9Y2A7 GHSR-202ENST00000427970 912 ntBASIC15.16■□□□□ 0.02
NCKAP1Q9Y2A7 RGS5-214ENST00000429865 754 ntTSL 3 BASIC15.16■□□□□ 0.02
NCKAP1Q9Y2A7 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC15.16■□□□□ 0.02
NCKAP1Q9Y2A7 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC15.16■□□□□ 0.02
NCKAP1Q9Y2A7 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NCKAP1Q9Y2A7 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
NCKAP1Q9Y2A7 MESTP3-201ENST00000503460 968 ntBASIC15.16■□□□□ 0.02
NCKAP1Q9Y2A7 SCARNA20.5-201ENST00000516991 142 ntBASIC15.16■□□□□ 0.02
NCKAP1Q9Y2A7 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC15.16■□□□□ 0.02
NCKAP1Q9Y2A7 AC126915.1-201ENST00000522847 1038 ntBASIC15.16■□□□□ 0.02
NCKAP1Q9Y2A7 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC15.16■□□□□ 0.02
NCKAP1Q9Y2A7 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC15.16■□□□□ 0.02
NCKAP1Q9Y2A7 IGHV3OR16-16-201ENST00000563644 343 ntBASIC15.16■□□□□ 0.02
NCKAP1Q9Y2A7 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC15.16■□□□□ 0.02
NCKAP1Q9Y2A7 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC15.16■□□□□ 0.02
NCKAP1Q9Y2A7 AC073413.1-201ENST00000603927 732 ntBASIC15.16■□□□□ 0.02
NCKAP1Q9Y2A7 AC007663.3-201ENST00000609632 465 ntBASIC15.16■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms