Protein–RNA interactions for Protein: Q9Y261

FOXA2, Hepatocyte nuclear factor 3-beta, humanhuman

Predicted RBP Predictions only

Length 457 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA2Q9Y261 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC12.29□□□□□ -0.44
FOXA2Q9Y261 AC008761.3-201ENST00000624803 892 ntBASIC12.29□□□□□ -0.44
FOXA2Q9Y261 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
FOXA2Q9Y261 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
FOXA2Q9Y261 INTS4P1-203ENST00000641008 3683 ntBASIC12.29□□□□□ -0.44
FOXA2Q9Y261 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
FOXA2Q9Y261 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
FOXA2Q9Y261 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC12.29□□□□□ -0.44
FOXA2Q9Y261 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC12.29□□□□□ -0.44
FOXA2Q9Y261 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
FOXA2Q9Y261 AC067750.1-201ENST00000608826 6545 ntBASIC12.29□□□□□ -0.44
FOXA2Q9Y261 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
FOXA2Q9Y261 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
FOXA2Q9Y261 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
FOXA2Q9Y261 RERG-209ENST00000546331 1383 ntTSL 2 BASIC12.29□□□□□ -0.44
FOXA2Q9Y261 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC12.29□□□□□ -0.44
FOXA2Q9Y261 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
FOXA2Q9Y261 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
FOXA2Q9Y261 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
FOXA2Q9Y261 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
FOXA2Q9Y261 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
FOXA2Q9Y261 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
FOXA2Q9Y261 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
FOXA2Q9Y261 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
FOXA2Q9Y261 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
FOXA2Q9Y261 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
FOXA2Q9Y261 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
FOXA2Q9Y261 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
FOXA2Q9Y261 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
FOXA2Q9Y261 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
FOXA2Q9Y261 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC12.28□□□□□ -0.44
FOXA2Q9Y261 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
FOXA2Q9Y261 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
FOXA2Q9Y261 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC12.28□□□□□ -0.44
FOXA2Q9Y261 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC12.28□□□□□ -0.44
FOXA2Q9Y261 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
FOXA2Q9Y261 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC12.28□□□□□ -0.44
FOXA2Q9Y261 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
FOXA2Q9Y261 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC12.28□□□□□ -0.44
FOXA2Q9Y261 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
FOXA2Q9Y261 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
FOXA2Q9Y261 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
FOXA2Q9Y261 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
FOXA2Q9Y261 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
FOXA2Q9Y261 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
FOXA2Q9Y261 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
FOXA2Q9Y261 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
FOXA2Q9Y261 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
FOXA2Q9Y261 AC236430.1-201ENST00000402231 743 ntBASIC12.28□□□□□ -0.44
FOXA2Q9Y261 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
FOXA2Q9Y261 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
FOXA2Q9Y261 DFFBP1-201ENST00000433250 979 ntBASIC12.28□□□□□ -0.44
FOXA2Q9Y261 AC002472.2-201ENST00000442739 958 ntBASIC12.28□□□□□ -0.44
FOXA2Q9Y261 SPTLC1P1-201ENST00000447199 261 ntBASIC12.28□□□□□ -0.44
FOXA2Q9Y261 OARD1-208ENST00000469104 704 ntTSL 2 BASIC12.28□□□□□ -0.44
FOXA2Q9Y261 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC12.28□□□□□ -0.44
FOXA2Q9Y261 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC12.28□□□□□ -0.44
FOXA2Q9Y261 AC055876.2-201ENST00000531834 546 ntBASIC12.28□□□□□ -0.44
FOXA2Q9Y261 GREM1-201ENST00000560677 623 ntTSL 4 BASIC12.28□□□□□ -0.44
FOXA2Q9Y261 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
FOXA2Q9Y261 RN7SL204P-201ENST00000582831 262 ntBASIC12.28□□□□□ -0.44
FOXA2Q9Y261 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC12.28□□□□□ -0.44
FOXA2Q9Y261 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC12.28□□□□□ -0.44
FOXA2Q9Y261 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC12.28□□□□□ -0.44
FOXA2Q9Y261 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC12.28□□□□□ -0.44
FOXA2Q9Y261 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
FOXA2Q9Y261 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
FOXA2Q9Y261 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
FOXA2Q9Y261 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
FOXA2Q9Y261 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
FOXA2Q9Y261 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC12.28□□□□□ -0.44
FOXA2Q9Y261 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
FOXA2Q9Y261 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
FOXA2Q9Y261 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
FOXA2Q9Y261 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
FOXA2Q9Y261 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
FOXA2Q9Y261 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
FOXA2Q9Y261 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
FOXA2Q9Y261 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC12.28□□□□□ -0.44
FOXA2Q9Y261 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
FOXA2Q9Y261 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC12.27□□□□□ -0.44
FOXA2Q9Y261 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
FOXA2Q9Y261 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
FOXA2Q9Y261 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
FOXA2Q9Y261 SLC9A7P1-202ENST00000556476 2239 ntBASIC12.27□□□□□ -0.44
FOXA2Q9Y261 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
FOXA2Q9Y261 ABR-205ENST00000544583 5595 ntTSL 2 BASIC12.27□□□□□ -0.44
FOXA2Q9Y261 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
FOXA2Q9Y261 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC12.27□□□□□ -0.44
FOXA2Q9Y261 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
FOXA2Q9Y261 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
FOXA2Q9Y261 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
FOXA2Q9Y261 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC12.27□□□□□ -0.44
FOXA2Q9Y261 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
FOXA2Q9Y261 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.44
FOXA2Q9Y261 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC12.27□□□□□ -0.44
FOXA2Q9Y261 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.44
FOXA2Q9Y261 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC12.27□□□□□ -0.45
FOXA2Q9Y261 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
FOXA2Q9Y261 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms