Protein–RNA interactions for Protein: Q9P2H5

USP35, Ubiquitin carboxyl-terminal hydrolase 35, humanhuman

Predictions only

Length 1,018 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP35Q9P2H5 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
USP35Q9P2H5 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC20.43■□□□□ 0.86
USP35Q9P2H5 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC20.43■□□□□ 0.86
USP35Q9P2H5 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
USP35Q9P2H5 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC20.42■□□□□ 0.86
USP35Q9P2H5 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC20.42■□□□□ 0.86
USP35Q9P2H5 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
USP35Q9P2H5 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
USP35Q9P2H5 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
USP35Q9P2H5 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
USP35Q9P2H5 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
USP35Q9P2H5 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
USP35Q9P2H5 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
USP35Q9P2H5 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
USP35Q9P2H5 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC20.42■□□□□ 0.86
USP35Q9P2H5 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
USP35Q9P2H5 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
USP35Q9P2H5 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC20.42■□□□□ 0.86
USP35Q9P2H5 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
USP35Q9P2H5 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
USP35Q9P2H5 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
USP35Q9P2H5 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC20.42■□□□□ 0.86
USP35Q9P2H5 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
USP35Q9P2H5 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
USP35Q9P2H5 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
USP35Q9P2H5 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
USP35Q9P2H5 AL008707.1-201ENST00000422498 534 ntBASIC20.42■□□□□ 0.86
USP35Q9P2H5 CMC1-204ENST00000423894 549 ntTSL 2 BASIC20.42■□□□□ 0.86
USP35Q9P2H5 RGS5-214ENST00000429865 754 ntTSL 3 BASIC20.42■□□□□ 0.86
USP35Q9P2H5 OARD1-204ENST00000464633 717 ntTSL 2 BASIC20.42■□□□□ 0.86
USP35Q9P2H5 AL391280.1-201ENST00000506969 1062 ntBASIC20.42■□□□□ 0.86
USP35Q9P2H5 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC20.42■□□□□ 0.86
USP35Q9P2H5 NCK2-206ENST00000522586 490 ntTSL 5 BASIC20.42■□□□□ 0.86
USP35Q9P2H5 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC20.42■□□□□ 0.86
USP35Q9P2H5 AP003171.2-201ENST00000528208 925 ntBASIC20.42■□□□□ 0.86
USP35Q9P2H5 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC20.42■□□□□ 0.86
USP35Q9P2H5 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC20.42■□□□□ 0.86
USP35Q9P2H5 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC20.42■□□□□ 0.86
USP35Q9P2H5 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC20.42■□□□□ 0.86
USP35Q9P2H5 AC026740.1-201ENST00000607068 791 ntBASIC20.42■□□□□ 0.86
USP35Q9P2H5 LINC00116-203ENST00000611969 441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
USP35Q9P2H5 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
USP35Q9P2H5 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
USP35Q9P2H5 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
USP35Q9P2H5 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
USP35Q9P2H5 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
USP35Q9P2H5 CASK-202ENST00000378158 3848 ntTSL 5 BASIC20.42■□□□□ 0.86
USP35Q9P2H5 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
USP35Q9P2H5 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
USP35Q9P2H5 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
USP35Q9P2H5 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC20.41■□□□□ 0.86
USP35Q9P2H5 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC20.41■□□□□ 0.86
USP35Q9P2H5 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC20.41■□□□□ 0.86
USP35Q9P2H5 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
USP35Q9P2H5 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
USP35Q9P2H5 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC20.41■□□□□ 0.86
USP35Q9P2H5 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
USP35Q9P2H5 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
USP35Q9P2H5 SDHAF4-201ENST00000370474 1196 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
USP35Q9P2H5 AC011742.3-201ENST00000439053 820 ntBASIC20.41■□□□□ 0.86
USP35Q9P2H5 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC20.41■□□□□ 0.86
USP35Q9P2H5 AC104784.1-201ENST00000473096 294 ntBASIC20.41■□□□□ 0.86
USP35Q9P2H5 EID1-202ENST00000560490 584 ntTSL 3 BASIC20.41■□□□□ 0.86
USP35Q9P2H5 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC20.41■□□□□ 0.86
USP35Q9P2H5 AC025181.2-201ENST00000606994 802 ntBASIC20.41■□□□□ 0.86
USP35Q9P2H5 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
USP35Q9P2H5 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
USP35Q9P2H5 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC20.41■□□□□ 0.86
USP35Q9P2H5 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC20.41■□□□□ 0.86
USP35Q9P2H5 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
USP35Q9P2H5 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
USP35Q9P2H5 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
USP35Q9P2H5 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
USP35Q9P2H5 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
USP35Q9P2H5 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
USP35Q9P2H5 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC20.41■□□□□ 0.86
USP35Q9P2H5 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC20.41■□□□□ 0.86
USP35Q9P2H5 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
USP35Q9P2H5 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
USP35Q9P2H5 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
USP35Q9P2H5 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
USP35Q9P2H5 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
USP35Q9P2H5 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
USP35Q9P2H5 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC20.4■□□□□ 0.86
USP35Q9P2H5 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
USP35Q9P2H5 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
USP35Q9P2H5 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
USP35Q9P2H5 RPS15-201ENST00000233609 534 ntTSL 2 BASIC20.4■□□□□ 0.86
USP35Q9P2H5 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
USP35Q9P2H5 SPDYE4-201ENST00000328794 923 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
USP35Q9P2H5 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
USP35Q9P2H5 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
USP35Q9P2H5 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
USP35Q9P2H5 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
USP35Q9P2H5 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
USP35Q9P2H5 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
USP35Q9P2H5 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC20.4■□□□□ 0.86
USP35Q9P2H5 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
USP35Q9P2H5 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
USP35Q9P2H5 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC20.4■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms