Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
PARPBPQ9NWS1 KRT18P25-201ENST00000508931 1278 ntBASIC13.63□□□□□ -0.23
PARPBPQ9NWS1 AP001582.1-201ENST00000525856 295 ntBASIC13.63□□□□□ -0.23
PARPBPQ9NWS1 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC13.63□□□□□ -0.23
PARPBPQ9NWS1 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
PARPBPQ9NWS1 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC13.63□□□□□ -0.23
PARPBPQ9NWS1 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
PARPBPQ9NWS1 AP005019.2-201ENST00000615104 511 ntBASIC13.63□□□□□ -0.23
PARPBPQ9NWS1 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC13.63□□□□□ -0.23
PARPBPQ9NWS1 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
PARPBPQ9NWS1 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
PARPBPQ9NWS1 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
PARPBPQ9NWS1 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC13.63□□□□□ -0.23
PARPBPQ9NWS1 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
PARPBPQ9NWS1 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
PARPBPQ9NWS1 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
PARPBPQ9NWS1 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
PARPBPQ9NWS1 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
PARPBPQ9NWS1 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC13.63□□□□□ -0.23
PARPBPQ9NWS1 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC13.63□□□□□ -0.23
PARPBPQ9NWS1 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
PARPBPQ9NWS1 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
PARPBPQ9NWS1 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
PARPBPQ9NWS1 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
PARPBPQ9NWS1 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
PARPBPQ9NWS1 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
PARPBPQ9NWS1 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
PARPBPQ9NWS1 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
PARPBPQ9NWS1 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
PARPBPQ9NWS1 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
PARPBPQ9NWS1 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
PARPBPQ9NWS1 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
PARPBPQ9NWS1 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
PARPBPQ9NWS1 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
PARPBPQ9NWS1 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
PARPBPQ9NWS1 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
PARPBPQ9NWS1 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
PARPBPQ9NWS1 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC13.62□□□□□ -0.23
PARPBPQ9NWS1 AC013268.4-201ENST00000637413 2228 ntBASIC13.62□□□□□ -0.23
PARPBPQ9NWS1 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
PARPBPQ9NWS1 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC13.62□□□□□ -0.23
PARPBPQ9NWS1 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC13.62□□□□□ -0.23
PARPBPQ9NWS1 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
PARPBPQ9NWS1 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
PARPBPQ9NWS1 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
PARPBPQ9NWS1 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
PARPBPQ9NWS1 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
PARPBPQ9NWS1 R3HDM2P2-201ENST00000401880 2116 ntBASIC13.62□□□□□ -0.23
PARPBPQ9NWS1 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
PARPBPQ9NWS1 AL512384.1-201ENST00000406683 331 ntBASIC13.62□□□□□ -0.23
PARPBPQ9NWS1 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC13.62□□□□□ -0.23
PARPBPQ9NWS1 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
PARPBPQ9NWS1 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC13.62□□□□□ -0.23
PARPBPQ9NWS1 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
PARPBPQ9NWS1 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC13.62□□□□□ -0.23
PARPBPQ9NWS1 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC13.62□□□□□ -0.23
PARPBPQ9NWS1 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
PARPBPQ9NWS1 PTP4A1P2-201ENST00000546033 454 ntBASIC13.62□□□□□ -0.23
PARPBPQ9NWS1 AC015936.2-201ENST00000593177 259 ntBASIC13.62□□□□□ -0.23
PARPBPQ9NWS1 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC13.62□□□□□ -0.23
PARPBPQ9NWS1 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC13.62□□□□□ -0.23
PARPBPQ9NWS1 AC012645.4-201ENST00000610691 1061 ntBASIC13.62□□□□□ -0.23
PARPBPQ9NWS1 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC13.62□□□□□ -0.23
PARPBPQ9NWS1 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC13.62□□□□□ -0.23
PARPBPQ9NWS1 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
PARPBPQ9NWS1 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC13.62□□□□□ -0.23
PARPBPQ9NWS1 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC13.62□□□□□ -0.23
PARPBPQ9NWS1 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
PARPBPQ9NWS1 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
PARPBPQ9NWS1 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
PARPBPQ9NWS1 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
PARPBPQ9NWS1 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
PARPBPQ9NWS1 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
PARPBPQ9NWS1 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC13.62□□□□□ -0.23
PARPBPQ9NWS1 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC13.62□□□□□ -0.23
PARPBPQ9NWS1 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
PARPBPQ9NWS1 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
PARPBPQ9NWS1 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
PARPBPQ9NWS1 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
PARPBPQ9NWS1 AC063926.2-201ENST00000623766 1308 ntBASIC13.62□□□□□ -0.23
PARPBPQ9NWS1 AC093525.8-201ENST00000624099 1342 ntBASIC13.62□□□□□ -0.23
PARPBPQ9NWS1 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC13.62□□□□□ -0.23
PARPBPQ9NWS1 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
PARPBPQ9NWS1 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC13.61□□□□□ -0.23
PARPBPQ9NWS1 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
PARPBPQ9NWS1 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC13.61□□□□□ -0.23
PARPBPQ9NWS1 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC13.61□□□□□ -0.23
PARPBPQ9NWS1 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
PARPBPQ9NWS1 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC13.61□□□□□ -0.23
PARPBPQ9NWS1 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
PARPBPQ9NWS1 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
PARPBPQ9NWS1 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
PARPBPQ9NWS1 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC13.61□□□□□ -0.23
PARPBPQ9NWS1 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
PARPBPQ9NWS1 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC13.61□□□□□ -0.23
PARPBPQ9NWS1 CICP11-201ENST00000434745 2827 ntBASIC13.61□□□□□ -0.23
PARPBPQ9NWS1 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC13.61□□□□□ -0.23
PARPBPQ9NWS1 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
PARPBPQ9NWS1 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
PARPBPQ9NWS1 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms