Protein–RNA interactions for Protein: Q9NTX5

ECHDC1, Ethylmalonyl-CoA decarboxylase, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1Q9NTX5 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
ECHDC1Q9NTX5 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC18.38■□□□□ 0.53
ECHDC1Q9NTX5 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ECHDC1Q9NTX5 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
ECHDC1Q9NTX5 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ECHDC1Q9NTX5 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC18.38■□□□□ 0.53
ECHDC1Q9NTX5 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC18.38■□□□□ 0.53
ECHDC1Q9NTX5 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ECHDC1Q9NTX5 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ECHDC1Q9NTX5 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
ECHDC1Q9NTX5 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ECHDC1Q9NTX5 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ECHDC1Q9NTX5 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
ECHDC1Q9NTX5 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ECHDC1Q9NTX5 TPM3P8-201ENST00000330554 643 ntBASIC18.38■□□□□ 0.53
ECHDC1Q9NTX5 AC079776.1-201ENST00000401540 1152 ntBASIC18.38■□□□□ 0.53
ECHDC1Q9NTX5 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
ECHDC1Q9NTX5 CNN2P8-201ENST00000421872 913 ntBASIC18.38■□□□□ 0.53
ECHDC1Q9NTX5 FAM197Y7-201ENST00000432892 766 ntBASIC18.38■□□□□ 0.53
ECHDC1Q9NTX5 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC18.38■□□□□ 0.53
ECHDC1Q9NTX5 AL590640.2-201ENST00000457038 527 ntBASIC18.38■□□□□ 0.53
ECHDC1Q9NTX5 MESTP3-201ENST00000503460 968 ntBASIC18.38■□□□□ 0.53
ECHDC1Q9NTX5 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
ECHDC1Q9NTX5 KRT17P8-201ENST00000540749 863 ntBASIC18.38■□□□□ 0.53
ECHDC1Q9NTX5 RPL28-206ENST00000558752 671 ntTSL 3 BASIC18.38■□□□□ 0.53
ECHDC1Q9NTX5 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC18.38■□□□□ 0.53
ECHDC1Q9NTX5 ECM1P1-201ENST00000604092 1279 ntBASIC18.38■□□□□ 0.53
ECHDC1Q9NTX5 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
ECHDC1Q9NTX5 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ECHDC1Q9NTX5 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
ECHDC1Q9NTX5 AC106881.1-201ENST00000605849 3329 ntBASIC18.38■□□□□ 0.53
ECHDC1Q9NTX5 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ECHDC1Q9NTX5 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC18.38■□□□□ 0.53
ECHDC1Q9NTX5 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
ECHDC1Q9NTX5 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ECHDC1Q9NTX5 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ECHDC1Q9NTX5 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ECHDC1Q9NTX5 AC003102.2-201ENST00000589195 1469 ntBASIC18.38■□□□□ 0.53
ECHDC1Q9NTX5 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ECHDC1Q9NTX5 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ECHDC1Q9NTX5 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ECHDC1Q9NTX5 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC18.38■□□□□ 0.53
ECHDC1Q9NTX5 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC18.38■□□□□ 0.53
ECHDC1Q9NTX5 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC18.38■□□□□ 0.53
ECHDC1Q9NTX5 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ECHDC1Q9NTX5 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ECHDC1Q9NTX5 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
ECHDC1Q9NTX5 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
ECHDC1Q9NTX5 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ECHDC1Q9NTX5 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
ECHDC1Q9NTX5 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC18.37■□□□□ 0.53
ECHDC1Q9NTX5 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC18.37■□□□□ 0.53
ECHDC1Q9NTX5 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
ECHDC1Q9NTX5 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ECHDC1Q9NTX5 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
ECHDC1Q9NTX5 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ECHDC1Q9NTX5 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
ECHDC1Q9NTX5 API5-203ENST00000455725 2257 ntTSL 2 BASIC18.37■□□□□ 0.53
ECHDC1Q9NTX5 AC112492.5-201ENST00000421897 457 ntBASIC18.37■□□□□ 0.53
ECHDC1Q9NTX5 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
ECHDC1Q9NTX5 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC18.37■□□□□ 0.53
ECHDC1Q9NTX5 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
ECHDC1Q9NTX5 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC18.37■□□□□ 0.53
ECHDC1Q9NTX5 RPL8-205ENST00000527914 551 ntTSL 3 BASIC18.37■□□□□ 0.53
ECHDC1Q9NTX5 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC18.37■□□□□ 0.53
ECHDC1Q9NTX5 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC18.37■□□□□ 0.53
ECHDC1Q9NTX5 LARP4-220ENST00000615080 856 ntTSL 5 BASIC18.37■□□□□ 0.53
ECHDC1Q9NTX5 AC138466.3-201ENST00000619983 221 ntBASIC18.37■□□□□ 0.53
ECHDC1Q9NTX5 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC18.37■□□□□ 0.53
ECHDC1Q9NTX5 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC18.37■□□□□ 0.53
ECHDC1Q9NTX5 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
ECHDC1Q9NTX5 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC18.37■□□□□ 0.53
ECHDC1Q9NTX5 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
ECHDC1Q9NTX5 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
ECHDC1Q9NTX5 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC18.37■□□□□ 0.53
ECHDC1Q9NTX5 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC18.37■□□□□ 0.53
ECHDC1Q9NTX5 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
ECHDC1Q9NTX5 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
ECHDC1Q9NTX5 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ECHDC1Q9NTX5 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
ECHDC1Q9NTX5 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
ECHDC1Q9NTX5 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ECHDC1Q9NTX5 MTHFR-210ENST00000641407 2387 ntBASIC18.37■□□□□ 0.53
ECHDC1Q9NTX5 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
ECHDC1Q9NTX5 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
ECHDC1Q9NTX5 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
ECHDC1Q9NTX5 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ECHDC1Q9NTX5 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ECHDC1Q9NTX5 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ECHDC1Q9NTX5 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ECHDC1Q9NTX5 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ECHDC1Q9NTX5 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
ECHDC1Q9NTX5 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
ECHDC1Q9NTX5 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
ECHDC1Q9NTX5 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
ECHDC1Q9NTX5 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
ECHDC1Q9NTX5 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
ECHDC1Q9NTX5 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ECHDC1Q9NTX5 AL138725.1-201ENST00000407347 1314 ntBASIC18.36■□□□□ 0.53
ECHDC1Q9NTX5 ARSEP1-201ENST00000420443 635 ntBASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 75.2 ms