Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
PDLIM7Q9NR12 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
PDLIM7Q9NR12 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC16.75■□□□□ 0.27
PDLIM7Q9NR12 AL021707.5-201ENST00000420118 461 ntTSL 5 BASIC16.75■□□□□ 0.27
PDLIM7Q9NR12 ISCA2P1-201ENST00000425548 448 ntBASIC16.75■□□□□ 0.27
PDLIM7Q9NR12 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
PDLIM7Q9NR12 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
PDLIM7Q9NR12 AL049795.2-201ENST00000515055 667 ntTSL 2 BASIC16.75■□□□□ 0.27
PDLIM7Q9NR12 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC16.75■□□□□ 0.27
PDLIM7Q9NR12 LINC01629-201ENST00000553613 581 ntTSL 4 BASIC16.75■□□□□ 0.27
PDLIM7Q9NR12 AC135983.4-201ENST00000564116 1262 ntBASIC16.75■□□□□ 0.27
PDLIM7Q9NR12 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC16.75■□□□□ 0.27
PDLIM7Q9NR12 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PDLIM7Q9NR12 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
PDLIM7Q9NR12 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PDLIM7Q9NR12 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PDLIM7Q9NR12 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
PDLIM7Q9NR12 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC16.75■□□□□ 0.27
PDLIM7Q9NR12 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
PDLIM7Q9NR12 MBP-202ENST00000355994 2772 ntTSL 5 BASIC16.75■□□□□ 0.27
PDLIM7Q9NR12 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PDLIM7Q9NR12 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PDLIM7Q9NR12 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC16.75■□□□□ 0.27
PDLIM7Q9NR12 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC16.75■□□□□ 0.27
PDLIM7Q9NR12 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PDLIM7Q9NR12 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC16.74■□□□□ 0.27
PDLIM7Q9NR12 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PDLIM7Q9NR12 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PDLIM7Q9NR12 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
PDLIM7Q9NR12 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PDLIM7Q9NR12 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
PDLIM7Q9NR12 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PDLIM7Q9NR12 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PDLIM7Q9NR12 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PDLIM7Q9NR12 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PDLIM7Q9NR12 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PDLIM7Q9NR12 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PDLIM7Q9NR12 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PDLIM7Q9NR12 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PDLIM7Q9NR12 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
PDLIM7Q9NR12 RPSAP31-201ENST00000416648 895 ntBASIC16.74■□□□□ 0.27
PDLIM7Q9NR12 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC16.74■□□□□ 0.27
PDLIM7Q9NR12 RPL13AP19-201ENST00000434320 584 ntBASIC16.74■□□□□ 0.27
PDLIM7Q9NR12 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC16.74■□□□□ 0.27
PDLIM7Q9NR12 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PDLIM7Q9NR12 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC16.74■□□□□ 0.27
PDLIM7Q9NR12 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC16.74■□□□□ 0.27
PDLIM7Q9NR12 AC242376.1-201ENST00000559033 726 ntBASIC16.74■□□□□ 0.27
PDLIM7Q9NR12 AC137723.1-201ENST00000584705 709 ntTSL 3 BASIC16.74■□□□□ 0.27
PDLIM7Q9NR12 RPS15-202ENST00000585665 467 ntTSL 3 BASIC16.74■□□□□ 0.27
PDLIM7Q9NR12 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC16.74■□□□□ 0.27
PDLIM7Q9NR12 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC16.74■□□□□ 0.27
PDLIM7Q9NR12 PCBP2-OT1-201ENST00000634357 590 ntBASIC16.74■□□□□ 0.27
PDLIM7Q9NR12 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PDLIM7Q9NR12 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC16.74■□□□□ 0.27
PDLIM7Q9NR12 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
PDLIM7Q9NR12 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC16.74■□□□□ 0.27
PDLIM7Q9NR12 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PDLIM7Q9NR12 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
PDLIM7Q9NR12 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PDLIM7Q9NR12 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
PDLIM7Q9NR12 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PDLIM7Q9NR12 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
PDLIM7Q9NR12 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC16.73■□□□□ 0.27
PDLIM7Q9NR12 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
PDLIM7Q9NR12 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
PDLIM7Q9NR12 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC16.73■□□□□ 0.27
PDLIM7Q9NR12 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
PDLIM7Q9NR12 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC16.73■□□□□ 0.27
PDLIM7Q9NR12 ACE3P-201ENST00000423435 1973 ntBASIC16.73■□□□□ 0.27
PDLIM7Q9NR12 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PDLIM7Q9NR12 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PDLIM7Q9NR12 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC16.73■□□□□ 0.27
PDLIM7Q9NR12 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PDLIM7Q9NR12 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
PDLIM7Q9NR12 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC16.73■□□□□ 0.27
PDLIM7Q9NR12 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC16.73■□□□□ 0.27
PDLIM7Q9NR12 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
PDLIM7Q9NR12 IGHV3-49-201ENST00000390625 439 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
PDLIM7Q9NR12 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PDLIM7Q9NR12 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC16.73■□□□□ 0.27
PDLIM7Q9NR12 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PDLIM7Q9NR12 MIR4783-201ENST00000580343 82 ntBASIC16.73■□□□□ 0.27
PDLIM7Q9NR12 AC005324.6-201ENST00000587972 613 ntBASIC16.73■□□□□ 0.27
PDLIM7Q9NR12 AC090164.2-201ENST00000611487 516 ntBASIC16.73■□□□□ 0.27
PDLIM7Q9NR12 AC138466.3-201ENST00000619983 221 ntBASIC16.73■□□□□ 0.27
PDLIM7Q9NR12 AL162426.1-201ENST00000624141 743 ntBASIC16.73■□□□□ 0.27
PDLIM7Q9NR12 AL805961.1-201ENST00000642026 753 ntBASIC16.73■□□□□ 0.27
PDLIM7Q9NR12 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
PDLIM7Q9NR12 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
PDLIM7Q9NR12 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PDLIM7Q9NR12 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
PDLIM7Q9NR12 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC16.73■□□□□ 0.27
PDLIM7Q9NR12 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
PDLIM7Q9NR12 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC16.73■□□□□ 0.27
PDLIM7Q9NR12 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
PDLIM7Q9NR12 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PDLIM7Q9NR12 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PDLIM7Q9NR12 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
PDLIM7Q9NR12 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms