Protein–RNA interactions for Protein: Q9NPA1

KCNMB3, Calcium-activated potassium channel subunit beta-3, humanhuman

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMB3Q9NPA1 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
KCNMB3Q9NPA1 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
KCNMB3Q9NPA1 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
KCNMB3Q9NPA1 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
KCNMB3Q9NPA1 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
KCNMB3Q9NPA1 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.3
KCNMB3Q9NPA1 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
KCNMB3Q9NPA1 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC16.89■□□□□ 0.3
KCNMB3Q9NPA1 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC16.89■□□□□ 0.3
KCNMB3Q9NPA1 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
KCNMB3Q9NPA1 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
KCNMB3Q9NPA1 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
KCNMB3Q9NPA1 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
KCNMB3Q9NPA1 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC16.89■□□□□ 0.29
KCNMB3Q9NPA1 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
KCNMB3Q9NPA1 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
KCNMB3Q9NPA1 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
KCNMB3Q9NPA1 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC16.89■□□□□ 0.29
KCNMB3Q9NPA1 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
KCNMB3Q9NPA1 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
KCNMB3Q9NPA1 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
KCNMB3Q9NPA1 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
KCNMB3Q9NPA1 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
KCNMB3Q9NPA1 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC16.89■□□□□ 0.29
KCNMB3Q9NPA1 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC16.89■□□□□ 0.29
KCNMB3Q9NPA1 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC16.89■□□□□ 0.29
KCNMB3Q9NPA1 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
KCNMB3Q9NPA1 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
KCNMB3Q9NPA1 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC16.89■□□□□ 0.29
KCNMB3Q9NPA1 NAA38-206ENST00000576384 424 ntTSL 2 BASIC16.89■□□□□ 0.29
KCNMB3Q9NPA1 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC16.89■□□□□ 0.29
KCNMB3Q9NPA1 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC16.89■□□□□ 0.29
KCNMB3Q9NPA1 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC16.89■□□□□ 0.29
KCNMB3Q9NPA1 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC16.89■□□□□ 0.29
KCNMB3Q9NPA1 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
KCNMB3Q9NPA1 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC16.89■□□□□ 0.29
KCNMB3Q9NPA1 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC16.89■□□□□ 0.29
KCNMB3Q9NPA1 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
KCNMB3Q9NPA1 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
KCNMB3Q9NPA1 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
KCNMB3Q9NPA1 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC16.89■□□□□ 0.29
KCNMB3Q9NPA1 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
KCNMB3Q9NPA1 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC16.89■□□□□ 0.29
KCNMB3Q9NPA1 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
KCNMB3Q9NPA1 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
KCNMB3Q9NPA1 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
KCNMB3Q9NPA1 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
KCNMB3Q9NPA1 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC16.88■□□□□ 0.29
KCNMB3Q9NPA1 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC16.88■□□□□ 0.29
KCNMB3Q9NPA1 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC16.88■□□□□ 0.29
KCNMB3Q9NPA1 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
KCNMB3Q9NPA1 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
KCNMB3Q9NPA1 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
KCNMB3Q9NPA1 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC16.88■□□□□ 0.29
KCNMB3Q9NPA1 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
KCNMB3Q9NPA1 RER1-203ENST00000378513 3000 ntTSL 3 BASIC16.88■□□□□ 0.29
KCNMB3Q9NPA1 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC16.88■□□□□ 0.29
KCNMB3Q9NPA1 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
KCNMB3Q9NPA1 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
KCNMB3Q9NPA1 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
KCNMB3Q9NPA1 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
KCNMB3Q9NPA1 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
KCNMB3Q9NPA1 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
KCNMB3Q9NPA1 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC16.88■□□□□ 0.29
KCNMB3Q9NPA1 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC16.88■□□□□ 0.29
KCNMB3Q9NPA1 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
KCNMB3Q9NPA1 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC16.88■□□□□ 0.29
KCNMB3Q9NPA1 GCOM2-201ENST00000509133 1104 ntBASIC16.88■□□□□ 0.29
KCNMB3Q9NPA1 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
KCNMB3Q9NPA1 HNRNPA1P48-202ENST00000565308 961 ntBASIC16.88■□□□□ 0.29
KCNMB3Q9NPA1 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
KCNMB3Q9NPA1 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
KCNMB3Q9NPA1 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
KCNMB3Q9NPA1 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC16.88■□□□□ 0.29
KCNMB3Q9NPA1 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
KCNMB3Q9NPA1 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
KCNMB3Q9NPA1 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
KCNMB3Q9NPA1 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC16.88■□□□□ 0.29
KCNMB3Q9NPA1 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC16.88■□□□□ 0.29
KCNMB3Q9NPA1 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
KCNMB3Q9NPA1 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
KCNMB3Q9NPA1 USP35-204ENST00000530267 2419 ntTSL 2 BASIC16.88■□□□□ 0.29
KCNMB3Q9NPA1 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC16.88■□□□□ 0.29
KCNMB3Q9NPA1 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
KCNMB3Q9NPA1 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC16.88■□□□□ 0.29
KCNMB3Q9NPA1 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
KCNMB3Q9NPA1 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC16.88■□□□□ 0.29
KCNMB3Q9NPA1 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC16.88■□□□□ 0.29
KCNMB3Q9NPA1 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC16.88■□□□□ 0.29
KCNMB3Q9NPA1 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
KCNMB3Q9NPA1 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
KCNMB3Q9NPA1 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC16.88■□□□□ 0.29
KCNMB3Q9NPA1 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
KCNMB3Q9NPA1 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
KCNMB3Q9NPA1 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
KCNMB3Q9NPA1 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC16.87■□□□□ 0.29
KCNMB3Q9NPA1 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
KCNMB3Q9NPA1 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC16.87■□□□□ 0.29
KCNMB3Q9NPA1 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC16.87■□□□□ 0.29
KCNMB3Q9NPA1 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms