Protein–RNA interactions for Protein: Q9H422

HIPK3, Homeodomain-interacting protein kinase 3, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3Q9H422 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC16.43■□□□□ 0.22
HIPK3Q9H422 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
HIPK3Q9H422 FAM90A7P-201ENST00000382628 1395 ntBASIC16.43■□□□□ 0.22
HIPK3Q9H422 FAM90A23P-201ENST00000400136 1395 ntBASIC16.43■□□□□ 0.22
HIPK3Q9H422 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
HIPK3Q9H422 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
HIPK3Q9H422 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
HIPK3Q9H422 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
HIPK3Q9H422 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
HIPK3Q9H422 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
HIPK3Q9H422 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HIPK3Q9H422 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HIPK3Q9H422 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC16.43■□□□□ 0.22
HIPK3Q9H422 LINC01237-201ENST00000415434 573 ntTSL 4 BASIC16.43■□□□□ 0.22
HIPK3Q9H422 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC16.43■□□□□ 0.22
HIPK3Q9H422 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
HIPK3Q9H422 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC16.43■□□□□ 0.22
HIPK3Q9H422 SCARNA21-201ENST00000517026 139 ntBASIC16.43■□□□□ 0.22
HIPK3Q9H422 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
HIPK3Q9H422 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC16.43■□□□□ 0.22
HIPK3Q9H422 RBM4B-202ENST00000524637 867 ntTSL 5 BASIC16.43■□□□□ 0.22
HIPK3Q9H422 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC16.43■□□□□ 0.22
HIPK3Q9H422 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC16.43■□□□□ 0.22
HIPK3Q9H422 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HIPK3Q9H422 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HIPK3Q9H422 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
HIPK3Q9H422 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HIPK3Q9H422 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
HIPK3Q9H422 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HIPK3Q9H422 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
HIPK3Q9H422 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HIPK3Q9H422 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
HIPK3Q9H422 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC16.43■□□□□ 0.22
HIPK3Q9H422 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HIPK3Q9H422 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
HIPK3Q9H422 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HIPK3Q9H422 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HIPK3Q9H422 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HIPK3Q9H422 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC16.42■□□□□ 0.22
HIPK3Q9H422 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
HIPK3Q9H422 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
HIPK3Q9H422 RHD-203ENST00000357542 1387 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
HIPK3Q9H422 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC16.42■□□□□ 0.22
HIPK3Q9H422 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
HIPK3Q9H422 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC16.42■□□□□ 0.22
HIPK3Q9H422 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC16.42■□□□□ 0.22
HIPK3Q9H422 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HIPK3Q9H422 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC16.42■□□□□ 0.22
HIPK3Q9H422 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
HIPK3Q9H422 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC16.42■□□□□ 0.22
HIPK3Q9H422 PFN2-206ENST00000461930 606 ntTSL 4 BASIC16.42■□□□□ 0.22
HIPK3Q9H422 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC16.42■□□□□ 0.22
HIPK3Q9H422 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
HIPK3Q9H422 AIPL1-211ENST00000576776 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
HIPK3Q9H422 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC16.42■□□□□ 0.22
HIPK3Q9H422 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
HIPK3Q9H422 AC009884.2-201ENST00000603110 324 ntBASIC16.42■□□□□ 0.22
HIPK3Q9H422 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC16.42■□□□□ 0.22
HIPK3Q9H422 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HIPK3Q9H422 RPL35-206ENST00000629845 340 ntTSL 5 BASIC16.42■□□□□ 0.22
HIPK3Q9H422 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HIPK3Q9H422 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HIPK3Q9H422 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC16.42■□□□□ 0.22
HIPK3Q9H422 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC16.42■□□□□ 0.22
HIPK3Q9H422 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
HIPK3Q9H422 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
HIPK3Q9H422 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
HIPK3Q9H422 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HIPK3Q9H422 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
HIPK3Q9H422 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC16.42■□□□□ 0.22
HIPK3Q9H422 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HIPK3Q9H422 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HIPK3Q9H422 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
HIPK3Q9H422 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC16.42■□□□□ 0.22
HIPK3Q9H422 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
HIPK3Q9H422 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HIPK3Q9H422 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HIPK3Q9H422 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HIPK3Q9H422 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HIPK3Q9H422 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
HIPK3Q9H422 AC006058.4-201ENST00000624016 1670 ntBASIC16.41■□□□□ 0.22
HIPK3Q9H422 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
HIPK3Q9H422 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
HIPK3Q9H422 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC16.41■□□□□ 0.22
HIPK3Q9H422 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
HIPK3Q9H422 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
HIPK3Q9H422 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC16.41■□□□□ 0.22
HIPK3Q9H422 TRO-205ENST00000399736 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
HIPK3Q9H422 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC16.41■□□□□ 0.22
HIPK3Q9H422 AC008825.2-201ENST00000603374 718 ntBASIC16.41■□□□□ 0.22
HIPK3Q9H422 WT1-AS_6.1-201ENST00000614919 121 ntBASIC16.41■□□□□ 0.22
HIPK3Q9H422 AP001065.2-201ENST00000617205 644 ntBASIC16.41■□□□□ 0.22
HIPK3Q9H422 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC16.41■□□□□ 0.22
HIPK3Q9H422 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC16.41■□□□□ 0.22
HIPK3Q9H422 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
HIPK3Q9H422 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
HIPK3Q9H422 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
HIPK3Q9H422 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
HIPK3Q9H422 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC16.41■□□□□ 0.22
HIPK3Q9H422 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 57.6 ms