Protein–RNA interactions for Protein: Q9H0A8

COMMD4, COMM domain-containing protein 4, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4Q9H0A8 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC13.45□□□□□ -0.26
COMMD4Q9H0A8 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
COMMD4Q9H0A8 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
COMMD4Q9H0A8 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC13.45□□□□□ -0.26
COMMD4Q9H0A8 NCOR2-202ENST00000404121 7175 ntTSL 5 BASIC13.45□□□□□ -0.26
COMMD4Q9H0A8 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
COMMD4Q9H0A8 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC13.45□□□□□ -0.26
COMMD4Q9H0A8 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
COMMD4Q9H0A8 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
COMMD4Q9H0A8 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
COMMD4Q9H0A8 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
COMMD4Q9H0A8 AC027601.5-201ENST00000624065 2482 ntBASIC13.45□□□□□ -0.26
COMMD4Q9H0A8 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
COMMD4Q9H0A8 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
COMMD4Q9H0A8 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC13.44□□□□□ -0.26
COMMD4Q9H0A8 AC092053.3-201ENST00000641308 4975 ntBASIC13.44□□□□□ -0.26
COMMD4Q9H0A8 FAM9C-205ENST00000542843 5858 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
COMMD4Q9H0A8 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
COMMD4Q9H0A8 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
COMMD4Q9H0A8 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC13.44□□□□□ -0.26
COMMD4Q9H0A8 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
COMMD4Q9H0A8 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
COMMD4Q9H0A8 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
COMMD4Q9H0A8 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC13.44□□□□□ -0.26
COMMD4Q9H0A8 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
COMMD4Q9H0A8 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
COMMD4Q9H0A8 CETN4P-206ENST00000642099 2168 ntBASIC13.44□□□□□ -0.26
COMMD4Q9H0A8 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC13.44□□□□□ -0.26
COMMD4Q9H0A8 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
COMMD4Q9H0A8 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
COMMD4Q9H0A8 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC13.44□□□□□ -0.26
COMMD4Q9H0A8 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC13.44□□□□□ -0.26
COMMD4Q9H0A8 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC13.44□□□□□ -0.26
COMMD4Q9H0A8 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
COMMD4Q9H0A8 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
COMMD4Q9H0A8 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC13.44□□□□□ -0.26
COMMD4Q9H0A8 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC13.44□□□□□ -0.26
COMMD4Q9H0A8 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC13.44□□□□□ -0.26
COMMD4Q9H0A8 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC13.44□□□□□ -0.26
COMMD4Q9H0A8 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC13.44□□□□□ -0.26
COMMD4Q9H0A8 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC13.44□□□□□ -0.26
COMMD4Q9H0A8 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC13.44□□□□□ -0.26
COMMD4Q9H0A8 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
COMMD4Q9H0A8 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC13.44□□□□□ -0.26
COMMD4Q9H0A8 AL589739.1-201ENST00000607720 493 ntBASIC13.44□□□□□ -0.26
COMMD4Q9H0A8 HOTTIP_1.1-201ENST00000620415 57 ntBASIC13.44□□□□□ -0.26
COMMD4Q9H0A8 AL513210.1-201ENST00000629608 234 ntBASIC13.44□□□□□ -0.26
COMMD4Q9H0A8 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
COMMD4Q9H0A8 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC13.44□□□□□ -0.26
COMMD4Q9H0A8 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
COMMD4Q9H0A8 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
COMMD4Q9H0A8 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
COMMD4Q9H0A8 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
COMMD4Q9H0A8 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
COMMD4Q9H0A8 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC13.44□□□□□ -0.26
COMMD4Q9H0A8 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC13.44□□□□□ -0.26
COMMD4Q9H0A8 DISC1-221ENST00000620189 6689 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
COMMD4Q9H0A8 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
COMMD4Q9H0A8 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
COMMD4Q9H0A8 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
COMMD4Q9H0A8 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC13.44□□□□□ -0.26
COMMD4Q9H0A8 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
COMMD4Q9H0A8 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC13.43□□□□□ -0.26
COMMD4Q9H0A8 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
COMMD4Q9H0A8 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
COMMD4Q9H0A8 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
COMMD4Q9H0A8 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
COMMD4Q9H0A8 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
COMMD4Q9H0A8 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
COMMD4Q9H0A8 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC13.43□□□□□ -0.26
COMMD4Q9H0A8 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
COMMD4Q9H0A8 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
COMMD4Q9H0A8 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC13.43□□□□□ -0.26
COMMD4Q9H0A8 AC097359.2-201ENST00000604992 2389 ntBASIC13.43□□□□□ -0.26
COMMD4Q9H0A8 STOM-202ENST00000347359 870 ntTSL 2 BASIC13.43□□□□□ -0.26
COMMD4Q9H0A8 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
COMMD4Q9H0A8 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC13.43□□□□□ -0.26
COMMD4Q9H0A8 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC13.43□□□□□ -0.26
COMMD4Q9H0A8 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC13.43□□□□□ -0.26
COMMD4Q9H0A8 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
COMMD4Q9H0A8 FAM58DP-201ENST00000428076 619 ntBASIC13.43□□□□□ -0.26
COMMD4Q9H0A8 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC13.43□□□□□ -0.26
COMMD4Q9H0A8 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC13.43□□□□□ -0.26
COMMD4Q9H0A8 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC13.43□□□□□ -0.26
COMMD4Q9H0A8 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC13.43□□□□□ -0.26
COMMD4Q9H0A8 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC13.43□□□□□ -0.26
COMMD4Q9H0A8 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC13.43□□□□□ -0.26
COMMD4Q9H0A8 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC13.43□□□□□ -0.26
COMMD4Q9H0A8 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC13.43□□□□□ -0.26
COMMD4Q9H0A8 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC13.43□□□□□ -0.26
COMMD4Q9H0A8 MIR6080-201ENST00000617359 66 ntBASIC13.43□□□□□ -0.26
COMMD4Q9H0A8 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
COMMD4Q9H0A8 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC13.43□□□□□ -0.26
COMMD4Q9H0A8 LINC00628-201ENST00000628516 1289 ntBASIC13.43□□□□□ -0.26
COMMD4Q9H0A8 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC13.43□□□□□ -0.26
COMMD4Q9H0A8 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
COMMD4Q9H0A8 ACOX1-201ENST00000293217 7514 ntAPPRIS P5 TSL 1 (best) BASIC13.43□□□□□ -0.26
COMMD4Q9H0A8 MYO16-203ENST00000357550 6779 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
COMMD4Q9H0A8 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
COMMD4Q9H0A8 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC13.43□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms