Protein–RNA interactions for Protein: Q99856

ARID3A, AT-rich interactive domain-containing protein 3A, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARID3AQ99856 CHRFAM7A-201ENST00000299847 6220 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ARID3AQ99856 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC17.42■□□□□ 0.38
ARID3AQ99856 UBE2I-204ENST00000397515 3109 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
ARID3AQ99856 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
ARID3AQ99856 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
ARID3AQ99856 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
ARID3AQ99856 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC17.42■□□□□ 0.38
ARID3AQ99856 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC17.42■□□□□ 0.38
ARID3AQ99856 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ARID3AQ99856 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC17.41■□□□□ 0.38
ARID3AQ99856 KLHL34-201ENST00000379499 3641 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
ARID3AQ99856 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC17.41■□□□□ 0.38
ARID3AQ99856 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC17.41■□□□□ 0.38
ARID3AQ99856 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
ARID3AQ99856 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC17.41■□□□□ 0.38
ARID3AQ99856 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
ARID3AQ99856 CYB561-202ENST00000392975 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ARID3AQ99856 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ARID3AQ99856 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
ARID3AQ99856 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ARID3AQ99856 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
ARID3AQ99856 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC17.41■□□□□ 0.38
ARID3AQ99856 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC17.41■□□□□ 0.38
ARID3AQ99856 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC17.41■□□□□ 0.38
ARID3AQ99856 RNA5SP410-201ENST00000516285 106 ntBASIC17.41■□□□□ 0.38
ARID3AQ99856 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC17.41■□□□□ 0.38
ARID3AQ99856 TSFM-210ENST00000550559 897 ntTSL 5 BASIC17.41■□□□□ 0.38
ARID3AQ99856 MIR4321-201ENST00000592276 80 ntBASIC17.41■□□□□ 0.38
ARID3AQ99856 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ARID3AQ99856 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ARID3AQ99856 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
ARID3AQ99856 AC012435.1-201ENST00000563287 3385 ntTSL 2 BASIC17.41■□□□□ 0.38
ARID3AQ99856 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ARID3AQ99856 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
ARID3AQ99856 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ARID3AQ99856 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
ARID3AQ99856 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
ARID3AQ99856 TMEM260-201ENST00000261556 4264 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
ARID3AQ99856 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ARID3AQ99856 PI4KB-203ENST00000368874 3934 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ARID3AQ99856 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC17.4■□□□□ 0.38
ARID3AQ99856 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ARID3AQ99856 AP3S2-216ENST00000617003 1561 ntBASIC17.4■□□□□ 0.38
ARID3AQ99856 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ARID3AQ99856 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC17.4■□□□□ 0.38
ARID3AQ99856 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ARID3AQ99856 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ARID3AQ99856 SLC1A1-201ENST00000262352 3722 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ARID3AQ99856 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
ARID3AQ99856 SLC4A5-201ENST00000346834 6233 ntAPPRIS P4 TSL 5 BASIC17.4■□□□□ 0.38
ARID3AQ99856 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC17.4■□□□□ 0.38
ARID3AQ99856 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ARID3AQ99856 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ARID3AQ99856 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
ARID3AQ99856 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC17.4■□□□□ 0.38
ARID3AQ99856 MPRIP-202ENST00000341712 3846 ntAPPRIS P3 TSL 5 BASIC17.4■□□□□ 0.38
ARID3AQ99856 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ARID3AQ99856 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ARID3AQ99856 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
ARID3AQ99856 FAM220BP-201ENST00000377689 816 ntBASIC17.4■□□□□ 0.38
ARID3AQ99856 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ARID3AQ99856 AC023141.5-201ENST00000458585 616 ntBASIC17.4■□□□□ 0.38
ARID3AQ99856 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC17.4■□□□□ 0.38
ARID3AQ99856 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC17.4■□□□□ 0.38
ARID3AQ99856 SNHG9-202ENST00000564014 471 ntBASIC17.4■□□□□ 0.38
ARID3AQ99856 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC17.4■□□□□ 0.38
ARID3AQ99856 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC17.4■□□□□ 0.38
ARID3AQ99856 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
ARID3AQ99856 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC17.4■□□□□ 0.38
ARID3AQ99856 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
ARID3AQ99856 METTL23-205ENST00000588302 925 ntTSL 5 BASIC17.4■□□□□ 0.38
ARID3AQ99856 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC17.4■□□□□ 0.38
ARID3AQ99856 AC009093.7-201ENST00000623853 1223 ntBASIC17.4■□□□□ 0.38
ARID3AQ99856 GRAMD1B-216ENST00000638157 3849 ntTSL 5 BASIC17.4■□□□□ 0.38
ARID3AQ99856 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC17.4■□□□□ 0.38
ARID3AQ99856 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
ARID3AQ99856 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
ARID3AQ99856 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC17.4■□□□□ 0.38
ARID3AQ99856 RBSN-207ENST00000476527 3005 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
ARID3AQ99856 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
ARID3AQ99856 ADCYAP1R1-207ENST00000614107 6575 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
ARID3AQ99856 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ARID3AQ99856 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ARID3AQ99856 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
ARID3AQ99856 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
ARID3AQ99856 USP49-201ENST00000373006 3177 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ARID3AQ99856 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
ARID3AQ99856 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ARID3AQ99856 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ARID3AQ99856 HIPK3-202ENST00000379016 7345 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
ARID3AQ99856 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC17.39■□□□□ 0.38
ARID3AQ99856 GLIS3-201ENST00000324333 6667 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
ARID3AQ99856 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
ARID3AQ99856 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
ARID3AQ99856 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
ARID3AQ99856 NLRP13-201ENST00000342929 3132 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
ARID3AQ99856 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ARID3AQ99856 TIPARP-201ENST00000295924 4109 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ARID3AQ99856 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ARID3AQ99856 GRIN1-202ENST00000371546 4114 ntTSL 5 BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 63.2 ms