Protein–RNA interactions for Protein: Q96RW7

HMCN1, Hemicentin-1, humanhuman

Predictions only

Length 5,635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1Q96RW7 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
HMCN1Q96RW7 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC4.41□□□□□ -1.7
HMCN1Q96RW7 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
HMCN1Q96RW7 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC4.4□□□□□ -1.7
HMCN1Q96RW7 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
HMCN1Q96RW7 PP12613-201ENST00000424958 2230 ntBASIC4.4□□□□□ -1.7
HMCN1Q96RW7 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC4.4□□□□□ -1.7
HMCN1Q96RW7 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
HMCN1Q96RW7 GALP-201ENST00000357330 938 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
HMCN1Q96RW7 ATRAID-202ENST00000405489 1059 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
HMCN1Q96RW7 CAPG-204ENST00000409724 1151 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
HMCN1Q96RW7 PHBP10-201ENST00000416467 784 ntBASIC4.4□□□□□ -1.7
HMCN1Q96RW7 IL6RP1-201ENST00000417848 1273 ntBASIC4.4□□□□□ -1.7
HMCN1Q96RW7 GALP-202ENST00000440823 889 ntTSL 5 BASIC4.4□□□□□ -1.7
HMCN1Q96RW7 AC139143.1-201ENST00000441772 1207 ntBASIC4.4□□□□□ -1.7
HMCN1Q96RW7 AC073089.1-201ENST00000457546 214 ntBASIC4.4□□□□□ -1.7
HMCN1Q96RW7 C5orf38-203ENST00000457752 387 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.7
HMCN1Q96RW7 AP001775.1-201ENST00000532608 586 ntBASIC4.4□□□□□ -1.7
HMCN1Q96RW7 AC021439.1-201ENST00000562975 591 ntTSL 4 BASIC4.4□□□□□ -1.7
HMCN1Q96RW7 AC005777.1-201ENST00000588332 187 ntBASIC4.4□□□□□ -1.7
HMCN1Q96RW7 TYMSP2-201ENST00000589501 424 ntBASIC4.4□□□□□ -1.7
HMCN1Q96RW7 AC104521.1-201ENST00000598582 279 ntTSL 5 BASIC4.4□□□□□ -1.7
HMCN1Q96RW7 AC007274.3-201ENST00000619838 385 ntBASIC4.4□□□□□ -1.7
HMCN1Q96RW7 AC012593.1-216ENST00000626183 444 ntTSL 5 BASIC4.4□□□□□ -1.7
HMCN1Q96RW7 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
HMCN1Q96RW7 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.7
HMCN1Q96RW7 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
HMCN1Q96RW7 AL136172.1-201ENST00000598590 1394 ntBASIC4.4□□□□□ -1.7
HMCN1Q96RW7 AC034205.3-201ENST00000603595 1376 ntBASIC4.4□□□□□ -1.7
HMCN1Q96RW7 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC4.4□□□□□ -1.7
HMCN1Q96RW7 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC4.4□□□□□ -1.7
HMCN1Q96RW7 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
HMCN1Q96RW7 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.7
HMCN1Q96RW7 CELF4-212ENST00000588597 1444 ntTSL 2 BASIC4.4□□□□□ -1.7
HMCN1Q96RW7 FAS-202ENST00000352159 1722 ntTSL 5 BASIC4.4□□□□□ -1.7
HMCN1Q96RW7 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC4.4□□□□□ -1.7
HMCN1Q96RW7 AC067852.2-201ENST00000590513 2313 ntBASIC4.4□□□□□ -1.7
HMCN1Q96RW7 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC4.4□□□□□ -1.7
HMCN1Q96RW7 ELOC-205ENST00000520210 1451 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
HMCN1Q96RW7 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
HMCN1Q96RW7 MDM1-205ENST00000430606 2170 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
HMCN1Q96RW7 HRASLS2-201ENST00000255695 742 ntAPPRIS P1 TSL 2 BASIC4.4□□□□□ -1.7
HMCN1Q96RW7 MDP1-201ENST00000288087 730 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
HMCN1Q96RW7 BNIP1-202ENST00000351486 1184 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
HMCN1Q96RW7 MPV17-207ENST00000403262 665 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
HMCN1Q96RW7 NDFIP2-AS1-201ENST00000457171 431 ntTSL 3 BASIC4.4□□□□□ -1.7
HMCN1Q96RW7 JPT1-205ENST00000470924 663 ntTSL 5 BASIC4.4□□□□□ -1.7
HMCN1Q96RW7 MT1X-202ENST00000562939 538 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
HMCN1Q96RW7 AC026461.1-201ENST00000567563 551 ntTSL 4 BASIC4.4□□□□□ -1.7
HMCN1Q96RW7 SMAD7-208ENST00000591805 1152 ntTSL 2 BASIC4.4□□□□□ -1.7
HMCN1Q96RW7 SNX20-205ENST00000610485 557 ntTSL 5 BASIC4.4□□□□□ -1.7
HMCN1Q96RW7 AC116631.1-201ENST00000640685 576 ntTSL 5 BASIC4.4□□□□□ -1.7
HMCN1Q96RW7 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC4.4□□□□□ -1.7
HMCN1Q96RW7 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
HMCN1Q96RW7 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC4.4□□□□□ -1.7
HMCN1Q96RW7 ODCP-201ENST00000459650 1639 ntBASIC4.4□□□□□ -1.7
HMCN1Q96RW7 AIPL1-203ENST00000381129 2959 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.7
HMCN1Q96RW7 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC4.4□□□□□ -1.7
HMCN1Q96RW7 AL359258.3-201ENST00000622910 2331 ntBASIC4.4□□□□□ -1.7
HMCN1Q96RW7 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
HMCN1Q96RW7 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
HMCN1Q96RW7 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.7
HMCN1Q96RW7 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
HMCN1Q96RW7 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC4.4□□□□□ -1.7
HMCN1Q96RW7 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC4.4□□□□□ -1.7
HMCN1Q96RW7 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
HMCN1Q96RW7 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC4.4□□□□□ -1.7
HMCN1Q96RW7 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC4.4□□□□□ -1.7
HMCN1Q96RW7 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
HMCN1Q96RW7 AP002353.1-201ENST00000528257 1599 ntBASIC4.4□□□□□ -1.71
HMCN1Q96RW7 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
HMCN1Q96RW7 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
HMCN1Q96RW7 KRTAP10-4-201ENST00000400374 1643 ntAPPRIS P2 BASIC4.4□□□□□ -1.71
HMCN1Q96RW7 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC4.4□□□□□ -1.71
HMCN1Q96RW7 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC4.4□□□□□ -1.71
HMCN1Q96RW7 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC4.4□□□□□ -1.71
HMCN1Q96RW7 VPREB1-202ENST00000403807 755 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.71
HMCN1Q96RW7 TUBB2BP1-201ENST00000404155 871 ntBASIC4.4□□□□□ -1.71
HMCN1Q96RW7 AC096677.3-201ENST00000413162 387 ntBASIC4.4□□□□□ -1.71
HMCN1Q96RW7 ZNF32-AS2-201ENST00000418966 905 ntTSL 5 BASIC4.4□□□□□ -1.71
HMCN1Q96RW7 AC010997.2-201ENST00000427610 260 ntTSL 3 BASIC4.4□□□□□ -1.71
HMCN1Q96RW7 LANCL1-203ENST00000431941 1270 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
HMCN1Q96RW7 Z84721.1-201ENST00000438841 372 ntBASIC4.4□□□□□ -1.71
HMCN1Q96RW7 RN7SL76P-201ENST00000482435 289 ntBASIC4.4□□□□□ -1.71
HMCN1Q96RW7 AC104123.1-201ENST00000502645 473 ntTSL 5 BASIC4.4□□□□□ -1.71
HMCN1Q96RW7 COQ10BP2-201ENST00000513804 724 ntBASIC4.4□□□□□ -1.71
HMCN1Q96RW7 AC124242.1-203ENST00000517747 817 ntTSL 3 BASIC4.4□□□□□ -1.71
HMCN1Q96RW7 MRNIP-216ENST00000521333 410 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.71
HMCN1Q96RW7 AC022784.6-202ENST00000523246 674 ntTSL 5 BASIC4.4□□□□□ -1.71
HMCN1Q96RW7 C12orf57-204ENST00000540506 551 ntTSL 2 BASIC4.4□□□□□ -1.71
HMCN1Q96RW7 CHRNA2-201ENST00000240132 1735 ntAPPRIS ALT2 TSL 2 BASIC4.4□□□□□ -1.71
HMCN1Q96RW7 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
HMCN1Q96RW7 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC4.4□□□□□ -1.71
HMCN1Q96RW7 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
HMCN1Q96RW7 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC4.4□□□□□ -1.71
HMCN1Q96RW7 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC4.4□□□□□ -1.71
HMCN1Q96RW7 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC4.4□□□□□ -1.71
HMCN1Q96RW7 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
HMCN1Q96RW7 LINC01101-201ENST00000622953 1884 ntBASIC4.4□□□□□ -1.71
HMCN1Q96RW7 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 163.6 ms