Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 AGAP7P-201ENST00000582299 2062 ntBASIC11.55□□□□□ -0.56
AP1S3Q96PC3 AGAP14-201ENST00000624701 2060 ntBASIC11.55□□□□□ -0.56
AP1S3Q96PC3 PCDHA4-204ENST00000618834 10557 ntBASIC11.55□□□□□ -0.56
AP1S3Q96PC3 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC11.55□□□□□ -0.56
AP1S3Q96PC3 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
AP1S3Q96PC3 TWSG1-201ENST00000262120 3756 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
AP1S3Q96PC3 PANK3-201ENST00000239231 10506 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
AP1S3Q96PC3 TRAPPC9-201ENST00000389328 4474 ntTSL 2 BASIC11.55□□□□□ -0.56
AP1S3Q96PC3 AC148477.4-201ENST00000613430 1793 ntBASIC11.55□□□□□ -0.56
AP1S3Q96PC3 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
AP1S3Q96PC3 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC11.55□□□□□ -0.56
AP1S3Q96PC3 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
AP1S3Q96PC3 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
AP1S3Q96PC3 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
AP1S3Q96PC3 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
AP1S3Q96PC3 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC11.55□□□□□ -0.56
AP1S3Q96PC3 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC11.55□□□□□ -0.56
AP1S3Q96PC3 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC11.55□□□□□ -0.56
AP1S3Q96PC3 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.56
AP1S3Q96PC3 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
AP1S3Q96PC3 KRT18P35-201ENST00000510488 1269 ntBASIC11.55□□□□□ -0.56
AP1S3Q96PC3 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
AP1S3Q96PC3 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
AP1S3Q96PC3 ARL16-209ENST00000573715 763 ntTSL 3 BASIC11.55□□□□□ -0.56
AP1S3Q96PC3 ARL16-211ENST00000576135 694 ntTSL 3 BASIC11.55□□□□□ -0.56
AP1S3Q96PC3 TCAP-202ENST00000578283 583 ntTSL 5 BASIC11.55□□□□□ -0.56
AP1S3Q96PC3 AC024267.1-201ENST00000582320 895 ntBASIC11.55□□□□□ -0.56
AP1S3Q96PC3 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC11.55□□□□□ -0.56
AP1S3Q96PC3 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC11.55□□□□□ -0.56
AP1S3Q96PC3 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
AP1S3Q96PC3 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC11.55□□□□□ -0.56
AP1S3Q96PC3 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
AP1S3Q96PC3 LRRC8A-203ENST00000372600 4355 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
AP1S3Q96PC3 CABIN1-203ENST00000398319 7480 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
AP1S3Q96PC3 PUM2-203ENST00000361078 6251 ntTSL 2 BASIC11.55□□□□□ -0.56
AP1S3Q96PC3 KCNV1-202ENST00000524391 6979 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
AP1S3Q96PC3 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
AP1S3Q96PC3 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
AP1S3Q96PC3 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC11.55□□□□□ -0.56
AP1S3Q96PC3 ZNF773-205ENST00000599847 5832 ntTSL 2 BASIC11.55□□□□□ -0.56
AP1S3Q96PC3 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
AP1S3Q96PC3 FBXW8-202ENST00000455858 4648 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
AP1S3Q96PC3 PCDH12-201ENST00000231484 6562 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
AP1S3Q96PC3 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
AP1S3Q96PC3 CPEB3-202ENST00000412050 7664 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
AP1S3Q96PC3 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
AP1S3Q96PC3 CAMK4-201ENST00000282356 12240 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
AP1S3Q96PC3 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
AP1S3Q96PC3 DDX54-201ENST00000306014 4377 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
AP1S3Q96PC3 RPL27A-201ENST00000314138 4916 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
AP1S3Q96PC3 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC11.55□□□□□ -0.56
AP1S3Q96PC3 NLRC5-203ENST00000436936 6724 ntAPPRIS P3 TSL 5 BASIC11.55□□□□□ -0.56
AP1S3Q96PC3 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
AP1S3Q96PC3 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC11.55□□□□□ -0.56
AP1S3Q96PC3 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
AP1S3Q96PC3 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC11.55□□□□□ -0.56
AP1S3Q96PC3 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC11.55□□□□□ -0.56
AP1S3Q96PC3 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
AP1S3Q96PC3 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
AP1S3Q96PC3 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
AP1S3Q96PC3 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
AP1S3Q96PC3 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
AP1S3Q96PC3 AC027601.5-201ENST00000624065 2482 ntBASIC11.54□□□□□ -0.56
AP1S3Q96PC3 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
AP1S3Q96PC3 ESYT1-202ENST00000394048 4388 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
AP1S3Q96PC3 PRDM16-208ENST00000514189 4236 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
AP1S3Q96PC3 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
AP1S3Q96PC3 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
AP1S3Q96PC3 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC11.54□□□□□ -0.56
AP1S3Q96PC3 AC099521.3-201ENST00000624251 2938 ntBASIC11.54□□□□□ -0.56
AP1S3Q96PC3 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
AP1S3Q96PC3 AC027612.1-201ENST00000445234 2395 ntBASIC11.54□□□□□ -0.56
AP1S3Q96PC3 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
AP1S3Q96PC3 AC127383.1-201ENST00000444697 1800 ntBASIC11.54□□□□□ -0.56
AP1S3Q96PC3 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
AP1S3Q96PC3 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
AP1S3Q96PC3 PTPRS-202ENST00000353284 4518 ntTSL 5 BASIC11.54□□□□□ -0.56
AP1S3Q96PC3 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
AP1S3Q96PC3 BCAS4-202ENST00000371608 6680 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
AP1S3Q96PC3 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC11.54□□□□□ -0.56
AP1S3Q96PC3 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
AP1S3Q96PC3 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
AP1S3Q96PC3 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
AP1S3Q96PC3 HERC2P9-206ENST00000529624 5187 ntBASIC11.54□□□□□ -0.56
AP1S3Q96PC3 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
AP1S3Q96PC3 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
AP1S3Q96PC3 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
AP1S3Q96PC3 MED22-202ENST00000371999 987 ntTSL 3 BASIC11.54□□□□□ -0.56
AP1S3Q96PC3 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC11.54□□□□□ -0.56
AP1S3Q96PC3 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC11.54□□□□□ -0.56
AP1S3Q96PC3 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC11.54□□□□□ -0.56
AP1S3Q96PC3 GPX1P2-201ENST00000429271 606 ntBASIC11.54□□□□□ -0.56
AP1S3Q96PC3 KRT18P67-201ENST00000432816 1264 ntBASIC11.54□□□□□ -0.56
AP1S3Q96PC3 AC018712.1-201ENST00000455767 687 ntBASIC11.54□□□□□ -0.56
AP1S3Q96PC3 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC11.54□□□□□ -0.56
AP1S3Q96PC3 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
AP1S3Q96PC3 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC11.54□□□□□ -0.56
AP1S3Q96PC3 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC11.54□□□□□ -0.56
AP1S3Q96PC3 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC11.54□□□□□ -0.56
AP1S3Q96PC3 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms