Protein–RNA interactions for Protein: Q96MF7

NSMCE2, E3 SUMO-protein ligase NSE2, humanhuman

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2Q96MF7 AC074338.1-201ENST00000416825 156 ntBASIC14.36□□□□□ -0.11
NSMCE2Q96MF7 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC14.36□□□□□ -0.11
NSMCE2Q96MF7 AL592309.1-201ENST00000443127 649 ntBASIC14.36□□□□□ -0.11
NSMCE2Q96MF7 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC14.36□□□□□ -0.11
NSMCE2Q96MF7 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC14.36□□□□□ -0.11
NSMCE2Q96MF7 AC022447.6-201ENST00000515522 438 ntBASIC14.36□□□□□ -0.11
NSMCE2Q96MF7 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
NSMCE2Q96MF7 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC14.36□□□□□ -0.11
NSMCE2Q96MF7 CITED2-204ENST00000618718 901 ntTSL 2 BASIC14.36□□□□□ -0.11
NSMCE2Q96MF7 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC14.36□□□□□ -0.11
NSMCE2Q96MF7 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC14.36□□□□□ -0.11
NSMCE2Q96MF7 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC14.36□□□□□ -0.11
NSMCE2Q96MF7 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC14.36□□□□□ -0.11
NSMCE2Q96MF7 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC14.36□□□□□ -0.11
NSMCE2Q96MF7 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NSMCE2Q96MF7 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
NSMCE2Q96MF7 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
NSMCE2Q96MF7 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
NSMCE2Q96MF7 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
NSMCE2Q96MF7 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
NSMCE2Q96MF7 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NSMCE2Q96MF7 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC14.35□□□□□ -0.11
NSMCE2Q96MF7 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC14.35□□□□□ -0.11
NSMCE2Q96MF7 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NSMCE2Q96MF7 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NSMCE2Q96MF7 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
NSMCE2Q96MF7 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
NSMCE2Q96MF7 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
NSMCE2Q96MF7 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
NSMCE2Q96MF7 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
NSMCE2Q96MF7 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
NSMCE2Q96MF7 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NSMCE2Q96MF7 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NSMCE2Q96MF7 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
NSMCE2Q96MF7 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
NSMCE2Q96MF7 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
NSMCE2Q96MF7 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NSMCE2Q96MF7 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NSMCE2Q96MF7 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC14.35□□□□□ -0.11
NSMCE2Q96MF7 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NSMCE2Q96MF7 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC14.35□□□□□ -0.11
NSMCE2Q96MF7 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
NSMCE2Q96MF7 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
NSMCE2Q96MF7 RPL18-209ENST00000550645 463 ntTSL 5 BASIC14.35□□□□□ -0.11
NSMCE2Q96MF7 RPL18-214ENST00000552588 559 ntTSL 3 BASIC14.35□□□□□ -0.11
NSMCE2Q96MF7 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC14.35□□□□□ -0.11
NSMCE2Q96MF7 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
NSMCE2Q96MF7 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC14.35□□□□□ -0.11
NSMCE2Q96MF7 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC14.35□□□□□ -0.11
NSMCE2Q96MF7 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC14.35□□□□□ -0.11
NSMCE2Q96MF7 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NSMCE2Q96MF7 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
NSMCE2Q96MF7 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
NSMCE2Q96MF7 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NSMCE2Q96MF7 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NSMCE2Q96MF7 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
NSMCE2Q96MF7 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
NSMCE2Q96MF7 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
NSMCE2Q96MF7 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
NSMCE2Q96MF7 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
NSMCE2Q96MF7 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC14.35□□□□□ -0.11
NSMCE2Q96MF7 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC14.35□□□□□ -0.11
NSMCE2Q96MF7 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
NSMCE2Q96MF7 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
NSMCE2Q96MF7 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NSMCE2Q96MF7 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NSMCE2Q96MF7 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
NSMCE2Q96MF7 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC14.35□□□□□ -0.11
NSMCE2Q96MF7 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NSMCE2Q96MF7 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NSMCE2Q96MF7 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC14.35□□□□□ -0.11
NSMCE2Q96MF7 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
NSMCE2Q96MF7 ZNF259P1-201ENST00000407656 1365 ntBASIC14.34□□□□□ -0.11
NSMCE2Q96MF7 KRT8P12-202ENST00000472924 1397 ntBASIC14.34□□□□□ -0.11
NSMCE2Q96MF7 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC14.34□□□□□ -0.11
NSMCE2Q96MF7 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
NSMCE2Q96MF7 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NSMCE2Q96MF7 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NSMCE2Q96MF7 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NSMCE2Q96MF7 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
NSMCE2Q96MF7 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
NSMCE2Q96MF7 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NSMCE2Q96MF7 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
NSMCE2Q96MF7 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
NSMCE2Q96MF7 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NSMCE2Q96MF7 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NSMCE2Q96MF7 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
NSMCE2Q96MF7 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NSMCE2Q96MF7 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
NSMCE2Q96MF7 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
NSMCE2Q96MF7 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC14.34□□□□□ -0.11
NSMCE2Q96MF7 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC14.34□□□□□ -0.11
NSMCE2Q96MF7 AL591424.1-201ENST00000442569 1213 ntBASIC14.34□□□□□ -0.11
NSMCE2Q96MF7 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC14.34□□□□□ -0.11
NSMCE2Q96MF7 KRT18P3-201ENST00000451602 1288 ntBASIC14.34□□□□□ -0.11
NSMCE2Q96MF7 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC14.34□□□□□ -0.11
NSMCE2Q96MF7 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC14.34□□□□□ -0.11
NSMCE2Q96MF7 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC14.34□□□□□ -0.11
NSMCE2Q96MF7 AC018529.1-201ENST00000613063 361 ntBASIC14.34□□□□□ -0.11
NSMCE2Q96MF7 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 69.5 ms