Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RFT1Q96AA3 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RFT1Q96AA3 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC13.51□□□□□ -0.25
RFT1Q96AA3 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC13.51□□□□□ -0.25
RFT1Q96AA3 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RFT1Q96AA3 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
RFT1Q96AA3 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC13.51□□□□□ -0.25
RFT1Q96AA3 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
RFT1Q96AA3 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
RFT1Q96AA3 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC13.51□□□□□ -0.25
RFT1Q96AA3 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
RFT1Q96AA3 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
RFT1Q96AA3 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RFT1Q96AA3 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC13.51□□□□□ -0.25
RFT1Q96AA3 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RFT1Q96AA3 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
RFT1Q96AA3 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RFT1Q96AA3 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
RFT1Q96AA3 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
RFT1Q96AA3 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RFT1Q96AA3 FABP5-202ENST00000396359 986 ntTSL 5 BASIC13.51□□□□□ -0.25
RFT1Q96AA3 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RFT1Q96AA3 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC13.51□□□□□ -0.25
RFT1Q96AA3 KRT18P32-201ENST00000424695 1287 ntBASIC13.51□□□□□ -0.25
RFT1Q96AA3 MKNK2P1-201ENST00000437526 628 ntBASIC13.51□□□□□ -0.25
RFT1Q96AA3 NME4-207ENST00000450036 985 ntTSL 3 BASIC13.51□□□□□ -0.25
RFT1Q96AA3 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC13.51□□□□□ -0.25
RFT1Q96AA3 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
RFT1Q96AA3 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC13.51□□□□□ -0.25
RFT1Q96AA3 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC13.51□□□□□ -0.25
RFT1Q96AA3 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC13.51□□□□□ -0.25
RFT1Q96AA3 AC022145.2-201ENST00000598203 171 ntBASIC13.51□□□□□ -0.25
RFT1Q96AA3 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC13.51□□□□□ -0.25
RFT1Q96AA3 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC13.51□□□□□ -0.25
RFT1Q96AA3 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
RFT1Q96AA3 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC13.51□□□□□ -0.25
RFT1Q96AA3 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
RFT1Q96AA3 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
RFT1Q96AA3 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
RFT1Q96AA3 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RFT1Q96AA3 AC089987.1-201ENST00000551654 2209 ntBASIC13.51□□□□□ -0.25
RFT1Q96AA3 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
RFT1Q96AA3 ITPR2-202ENST00000381340 11405 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RFT1Q96AA3 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
RFT1Q96AA3 ELL2P1-201ENST00000413990 1906 ntBASIC13.51□□□□□ -0.25
RFT1Q96AA3 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
RFT1Q96AA3 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC13.5□□□□□ -0.25
RFT1Q96AA3 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RFT1Q96AA3 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC13.5□□□□□ -0.25
RFT1Q96AA3 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RFT1Q96AA3 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC13.5□□□□□ -0.25
RFT1Q96AA3 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC13.5□□□□□ -0.25
RFT1Q96AA3 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RFT1Q96AA3 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
RFT1Q96AA3 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
RFT1Q96AA3 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
RFT1Q96AA3 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
RFT1Q96AA3 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC13.5□□□□□ -0.25
RFT1Q96AA3 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC13.5□□□□□ -0.25
RFT1Q96AA3 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
RFT1Q96AA3 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
RFT1Q96AA3 COL20A1-203ENST00000422202 8097 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
RFT1Q96AA3 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RFT1Q96AA3 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RFT1Q96AA3 MST1P2-201ENST00000457982 2291 ntBASIC13.5□□□□□ -0.25
RFT1Q96AA3 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC13.5□□□□□ -0.25
RFT1Q96AA3 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC13.5□□□□□ -0.25
RFT1Q96AA3 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
RFT1Q96AA3 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RFT1Q96AA3 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RFT1Q96AA3 CD81-202ENST00000381036 880 ntTSL 3 BASIC13.5□□□□□ -0.25
RFT1Q96AA3 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC13.5□□□□□ -0.25
RFT1Q96AA3 FAM58DP-201ENST00000428076 619 ntBASIC13.5□□□□□ -0.25
RFT1Q96AA3 AL353705.2-201ENST00000428243 662 ntBASIC13.5□□□□□ -0.25
RFT1Q96AA3 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC13.5□□□□□ -0.25
RFT1Q96AA3 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC13.5□□□□□ -0.25
RFT1Q96AA3 EEF1DP4-201ENST00000446006 880 ntBASIC13.5□□□□□ -0.25
RFT1Q96AA3 FXR1-221ENST00000491674 365 ntTSL 2 BASIC13.5□□□□□ -0.25
RFT1Q96AA3 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
RFT1Q96AA3 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC13.5□□□□□ -0.25
RFT1Q96AA3 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RFT1Q96AA3 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC13.5□□□□□ -0.25
RFT1Q96AA3 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC13.5□□□□□ -0.25
RFT1Q96AA3 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC13.5□□□□□ -0.25
RFT1Q96AA3 AC003101.2-201ENST00000612557 442 ntBASIC13.5□□□□□ -0.25
RFT1Q96AA3 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
RFT1Q96AA3 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC13.5□□□□□ -0.25
RFT1Q96AA3 AP001267.2-201ENST00000532619 2086 ntBASIC13.5□□□□□ -0.25
RFT1Q96AA3 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RFT1Q96AA3 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC13.5□□□□□ -0.25
RFT1Q96AA3 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RFT1Q96AA3 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
RFT1Q96AA3 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
RFT1Q96AA3 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
RFT1Q96AA3 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
RFT1Q96AA3 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RFT1Q96AA3 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC13.5□□□□□ -0.25
RFT1Q96AA3 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RFT1Q96AA3 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC13.5□□□□□ -0.25
RFT1Q96AA3 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms