Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
NUP43Q8NFH3 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC14.21□□□□□ -0.13
NUP43Q8NFH3 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC14.21□□□□□ -0.13
NUP43Q8NFH3 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC14.21□□□□□ -0.13
NUP43Q8NFH3 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NUP43Q8NFH3 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NUP43Q8NFH3 AC002472.2-201ENST00000442739 958 ntBASIC14.21□□□□□ -0.13
NUP43Q8NFH3 GALT-202ENST00000450095 1280 ntTSL 2 BASIC14.21□□□□□ -0.13
NUP43Q8NFH3 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC14.21□□□□□ -0.13
NUP43Q8NFH3 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC14.21□□□□□ -0.13
NUP43Q8NFH3 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
NUP43Q8NFH3 GLI4-203ENST00000517468 963 ntTSL 5 BASIC14.21□□□□□ -0.13
NUP43Q8NFH3 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC14.21□□□□□ -0.13
NUP43Q8NFH3 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC14.21□□□□□ -0.13
NUP43Q8NFH3 CDK4-206ENST00000549606 558 ntTSL 2 BASIC14.21□□□□□ -0.13
NUP43Q8NFH3 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC14.21□□□□□ -0.13
NUP43Q8NFH3 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
NUP43Q8NFH3 AC124283.3-201ENST00000570869 594 ntBASIC14.21□□□□□ -0.13
NUP43Q8NFH3 TMEM261P1-201ENST00000604899 340 ntBASIC14.21□□□□□ -0.13
NUP43Q8NFH3 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
NUP43Q8NFH3 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
NUP43Q8NFH3 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
NUP43Q8NFH3 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC14.21□□□□□ -0.13
NUP43Q8NFH3 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
NUP43Q8NFH3 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC14.21□□□□□ -0.13
NUP43Q8NFH3 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NUP43Q8NFH3 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
NUP43Q8NFH3 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC14.21□□□□□ -0.13
NUP43Q8NFH3 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
NUP43Q8NFH3 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
NUP43Q8NFH3 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
NUP43Q8NFH3 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.14
NUP43Q8NFH3 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
NUP43Q8NFH3 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
NUP43Q8NFH3 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
NUP43Q8NFH3 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
NUP43Q8NFH3 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
NUP43Q8NFH3 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
NUP43Q8NFH3 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
NUP43Q8NFH3 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
NUP43Q8NFH3 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NUP43Q8NFH3 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NUP43Q8NFH3 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NUP43Q8NFH3 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NUP43Q8NFH3 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC14.2□□□□□ -0.14
NUP43Q8NFH3 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NUP43Q8NFH3 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
NUP43Q8NFH3 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NUP43Q8NFH3 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NUP43Q8NFH3 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
NUP43Q8NFH3 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
NUP43Q8NFH3 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NUP43Q8NFH3 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
NUP43Q8NFH3 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
NUP43Q8NFH3 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC14.2□□□□□ -0.14
NUP43Q8NFH3 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
NUP43Q8NFH3 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
NUP43Q8NFH3 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC14.2□□□□□ -0.14
NUP43Q8NFH3 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
NUP43Q8NFH3 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NUP43Q8NFH3 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NUP43Q8NFH3 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
NUP43Q8NFH3 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
NUP43Q8NFH3 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
NUP43Q8NFH3 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
NUP43Q8NFH3 AC236430.1-201ENST00000402231 743 ntBASIC14.2□□□□□ -0.14
NUP43Q8NFH3 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC14.2□□□□□ -0.14
NUP43Q8NFH3 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NUP43Q8NFH3 HNRNPA1P13-201ENST00000510646 963 ntBASIC14.2□□□□□ -0.14
NUP43Q8NFH3 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
NUP43Q8NFH3 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC14.2□□□□□ -0.14
NUP43Q8NFH3 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC14.2□□□□□ -0.14
NUP43Q8NFH3 IFT20-206ENST00000578122 834 ntTSL 2 BASIC14.2□□□□□ -0.14
NUP43Q8NFH3 IFT20-208ENST00000578985 831 ntTSL 3 BASIC14.2□□□□□ -0.14
NUP43Q8NFH3 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC14.2□□□□□ -0.14
NUP43Q8NFH3 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC14.2□□□□□ -0.14
NUP43Q8NFH3 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
NUP43Q8NFH3 PRSS30P-206ENST00000641773 873 ntBASIC14.2□□□□□ -0.14
NUP43Q8NFH3 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NUP43Q8NFH3 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
NUP43Q8NFH3 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
NUP43Q8NFH3 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NUP43Q8NFH3 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NUP43Q8NFH3 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NUP43Q8NFH3 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NUP43Q8NFH3 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NUP43Q8NFH3 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NUP43Q8NFH3 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NUP43Q8NFH3 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NUP43Q8NFH3 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
NUP43Q8NFH3 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NUP43Q8NFH3 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC14.2□□□□□ -0.14
NUP43Q8NFH3 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
NUP43Q8NFH3 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
NUP43Q8NFH3 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC14.2□□□□□ -0.14
NUP43Q8NFH3 MTHFR-210ENST00000641407 2387 ntBASIC14.19□□□□□ -0.14
NUP43Q8NFH3 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
NUP43Q8NFH3 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
NUP43Q8NFH3 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
NUP43Q8NFH3 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 92.6 ms