Protein–RNA interactions for Protein: Q8NEP3

DNAAF1, Dynein assembly factor 1, axonemal, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF1Q8NEP3 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
DNAAF1Q8NEP3 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
DNAAF1Q8NEP3 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
DNAAF1Q8NEP3 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
DNAAF1Q8NEP3 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
DNAAF1Q8NEP3 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
DNAAF1Q8NEP3 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
DNAAF1Q8NEP3 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
DNAAF1Q8NEP3 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
DNAAF1Q8NEP3 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
DNAAF1Q8NEP3 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
DNAAF1Q8NEP3 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
DNAAF1Q8NEP3 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
DNAAF1Q8NEP3 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC13.41□□□□□ -0.26
DNAAF1Q8NEP3 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
DNAAF1Q8NEP3 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
DNAAF1Q8NEP3 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
DNAAF1Q8NEP3 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
DNAAF1Q8NEP3 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
DNAAF1Q8NEP3 TKT-201ENST00000296289 1931 ntTSL 5 BASIC13.41□□□□□ -0.26
DNAAF1Q8NEP3 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC13.41□□□□□ -0.26
DNAAF1Q8NEP3 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
DNAAF1Q8NEP3 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
DNAAF1Q8NEP3 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC13.41□□□□□ -0.26
DNAAF1Q8NEP3 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC13.41□□□□□ -0.26
DNAAF1Q8NEP3 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
DNAAF1Q8NEP3 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC13.41□□□□□ -0.26
DNAAF1Q8NEP3 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
DNAAF1Q8NEP3 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
DNAAF1Q8NEP3 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
DNAAF1Q8NEP3 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
DNAAF1Q8NEP3 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC13.41□□□□□ -0.26
DNAAF1Q8NEP3 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
DNAAF1Q8NEP3 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
DNAAF1Q8NEP3 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC13.41□□□□□ -0.26
DNAAF1Q8NEP3 RPSAP43-201ENST00000402237 625 ntBASIC13.41□□□□□ -0.26
DNAAF1Q8NEP3 UPF3AP3-201ENST00000420996 769 ntBASIC13.41□□□□□ -0.26
DNAAF1Q8NEP3 MTND6P24-201ENST00000440466 518 ntBASIC13.41□□□□□ -0.26
DNAAF1Q8NEP3 TARDBPP1-201ENST00000442013 1203 ntBASIC13.41□□□□□ -0.26
DNAAF1Q8NEP3 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC13.41□□□□□ -0.26
DNAAF1Q8NEP3 SERBP1P3-201ENST00000459980 809 ntBASIC13.41□□□□□ -0.26
DNAAF1Q8NEP3 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC13.41□□□□□ -0.26
DNAAF1Q8NEP3 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC13.41□□□□□ -0.26
DNAAF1Q8NEP3 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
DNAAF1Q8NEP3 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC13.41□□□□□ -0.26
DNAAF1Q8NEP3 AC112482.1-201ENST00000492080 688 ntBASIC13.41□□□□□ -0.26
DNAAF1Q8NEP3 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC13.41□□□□□ -0.26
DNAAF1Q8NEP3 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC13.41□□□□□ -0.26
DNAAF1Q8NEP3 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC13.41□□□□□ -0.26
DNAAF1Q8NEP3 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC13.41□□□□□ -0.26
DNAAF1Q8NEP3 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC13.41□□□□□ -0.26
DNAAF1Q8NEP3 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC13.41□□□□□ -0.26
DNAAF1Q8NEP3 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC13.41□□□□□ -0.26
DNAAF1Q8NEP3 AL079307.3-201ENST00000556114 283 ntBASIC13.41□□□□□ -0.26
DNAAF1Q8NEP3 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
DNAAF1Q8NEP3 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
DNAAF1Q8NEP3 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC13.41□□□□□ -0.26
DNAAF1Q8NEP3 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC13.41□□□□□ -0.26
DNAAF1Q8NEP3 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC13.41□□□□□ -0.26
DNAAF1Q8NEP3 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
DNAAF1Q8NEP3 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC13.41□□□□□ -0.26
DNAAF1Q8NEP3 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
DNAAF1Q8NEP3 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
DNAAF1Q8NEP3 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
DNAAF1Q8NEP3 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
DNAAF1Q8NEP3 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
DNAAF1Q8NEP3 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC13.41□□□□□ -0.26
DNAAF1Q8NEP3 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
DNAAF1Q8NEP3 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
DNAAF1Q8NEP3 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
DNAAF1Q8NEP3 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
DNAAF1Q8NEP3 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
DNAAF1Q8NEP3 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
DNAAF1Q8NEP3 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
DNAAF1Q8NEP3 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
DNAAF1Q8NEP3 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
DNAAF1Q8NEP3 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC13.4□□□□□ -0.26
DNAAF1Q8NEP3 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
DNAAF1Q8NEP3 GRAMD4P3-201ENST00000621665 1669 ntBASIC13.4□□□□□ -0.26
DNAAF1Q8NEP3 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
DNAAF1Q8NEP3 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC13.4□□□□□ -0.26
DNAAF1Q8NEP3 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
DNAAF1Q8NEP3 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
DNAAF1Q8NEP3 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
DNAAF1Q8NEP3 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
DNAAF1Q8NEP3 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
DNAAF1Q8NEP3 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
DNAAF1Q8NEP3 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
DNAAF1Q8NEP3 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
DNAAF1Q8NEP3 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
DNAAF1Q8NEP3 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
DNAAF1Q8NEP3 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
DNAAF1Q8NEP3 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
DNAAF1Q8NEP3 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
DNAAF1Q8NEP3 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
DNAAF1Q8NEP3 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
DNAAF1Q8NEP3 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
DNAAF1Q8NEP3 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC13.4□□□□□ -0.26
DNAAF1Q8NEP3 BX842568.4-201ENST00000421222 227 ntBASIC13.4□□□□□ -0.26
DNAAF1Q8NEP3 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC13.4□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms