Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SIX5Q8N196 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
SIX5Q8N196 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
SIX5Q8N196 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SIX5Q8N196 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC15.54■□□□□ 0.08
SIX5Q8N196 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
SIX5Q8N196 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SIX5Q8N196 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
SIX5Q8N196 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC15.54■□□□□ 0.08
SIX5Q8N196 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
SIX5Q8N196 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SIX5Q8N196 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SIX5Q8N196 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SIX5Q8N196 ANK1-203ENST00000314214 1185 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SIX5Q8N196 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC15.54■□□□□ 0.08
SIX5Q8N196 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
SIX5Q8N196 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SIX5Q8N196 S100A2-203ENST00000368709 457 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
SIX5Q8N196 CITED1-202ENST00000373619 886 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
SIX5Q8N196 CST9L-201ENST00000376979 959 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SIX5Q8N196 TMEM219-202ENST00000414689 1024 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SIX5Q8N196 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC15.54■□□□□ 0.08
SIX5Q8N196 AL353637.1-201ENST00000451571 732 ntBASIC15.54■□□□□ 0.08
SIX5Q8N196 TUBB8P8-201ENST00000458717 1058 ntBASIC15.54■□□□□ 0.08
SIX5Q8N196 RN7SL181P-201ENST00000462921 277 ntBASIC15.54■□□□□ 0.08
SIX5Q8N196 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SIX5Q8N196 MARK2P5-201ENST00000507649 634 ntBASIC15.54■□□□□ 0.08
SIX5Q8N196 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC15.54■□□□□ 0.08
SIX5Q8N196 RTN3P1-201ENST00000536295 711 ntBASIC15.54■□□□□ 0.08
SIX5Q8N196 LINC01629-201ENST00000553613 581 ntTSL 4 BASIC15.54■□□□□ 0.08
SIX5Q8N196 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC15.54■□□□□ 0.08
SIX5Q8N196 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SIX5Q8N196 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC15.54■□□□□ 0.08
SIX5Q8N196 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC15.54■□□□□ 0.08
SIX5Q8N196 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC15.54■□□□□ 0.08
SIX5Q8N196 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SIX5Q8N196 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
SIX5Q8N196 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SIX5Q8N196 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SIX5Q8N196 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SIX5Q8N196 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC15.54■□□□□ 0.08
SIX5Q8N196 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SIX5Q8N196 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
SIX5Q8N196 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SIX5Q8N196 AC006449.6-201ENST00000612330 2296 ntBASIC15.54■□□□□ 0.08
SIX5Q8N196 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC15.53■□□□□ 0.08
SIX5Q8N196 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC15.53■□□□□ 0.08
SIX5Q8N196 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
SIX5Q8N196 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SIX5Q8N196 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SIX5Q8N196 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SIX5Q8N196 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
SIX5Q8N196 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
SIX5Q8N196 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SIX5Q8N196 AC106886.4-201ENST00000623557 2502 ntBASIC15.53■□□□□ 0.08
SIX5Q8N196 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC15.53■□□□□ 0.08
SIX5Q8N196 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SIX5Q8N196 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SIX5Q8N196 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC15.53■□□□□ 0.08
SIX5Q8N196 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SIX5Q8N196 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SIX5Q8N196 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
SIX5Q8N196 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SIX5Q8N196 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
SIX5Q8N196 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
SIX5Q8N196 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SIX5Q8N196 MRPS22-201ENST00000310776 1120 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
SIX5Q8N196 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SIX5Q8N196 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SIX5Q8N196 LSM5-207ENST00000410044 687 ntTSL 3 BASIC15.53■□□□□ 0.08
SIX5Q8N196 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC15.53■□□□□ 0.08
SIX5Q8N196 AC125604.1-201ENST00000496255 707 ntBASIC15.53■□□□□ 0.08
SIX5Q8N196 AC022616.1-201ENST00000518688 554 ntBASIC15.53■□□□□ 0.08
SIX5Q8N196 CSTF3-206ENST00000524827 693 ntTSL 3 BASIC15.53■□□□□ 0.08
SIX5Q8N196 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC15.53■□□□□ 0.08
SIX5Q8N196 AC103988.2-201ENST00000561804 725 ntBASIC15.53■□□□□ 0.08
SIX5Q8N196 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SIX5Q8N196 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC15.53■□□□□ 0.08
SIX5Q8N196 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC15.53■□□□□ 0.08
SIX5Q8N196 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC15.53■□□□□ 0.08
SIX5Q8N196 AC103691.2-201ENST00000618824 433 ntBASIC15.53■□□□□ 0.08
SIX5Q8N196 AL136295.7-201ENST00000619226 1200 ntBASIC15.53■□□□□ 0.08
SIX5Q8N196 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC15.53■□□□□ 0.08
SIX5Q8N196 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SIX5Q8N196 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
SIX5Q8N196 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC15.53■□□□□ 0.08
SIX5Q8N196 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SIX5Q8N196 MVK-214ENST00000629016 1591 ntTSL 5 BASIC15.53■□□□□ 0.08
SIX5Q8N196 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SIX5Q8N196 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SIX5Q8N196 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SIX5Q8N196 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC15.53■□□□□ 0.08
SIX5Q8N196 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
SIX5Q8N196 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
SIX5Q8N196 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SIX5Q8N196 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
SIX5Q8N196 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
SIX5Q8N196 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
SIX5Q8N196 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
SIX5Q8N196 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 56.4 ms