Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
LYSMD2Q8IV50 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
LYSMD2Q8IV50 GNPDA1-204ENST00000503794 2622 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LYSMD2Q8IV50 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC13.35□□□□□ -0.27
LYSMD2Q8IV50 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
LYSMD2Q8IV50 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC13.35□□□□□ -0.27
LYSMD2Q8IV50 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC13.35□□□□□ -0.27
LYSMD2Q8IV50 ELN-209ENST00000380576 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
LYSMD2Q8IV50 SLC6A2-201ENST00000219833 2858 ntTSL 5 BASIC13.34□□□□□ -0.27
LYSMD2Q8IV50 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LYSMD2Q8IV50 OSBPL9-201ENST00000361556 2721 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
LYSMD2Q8IV50 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC13.34□□□□□ -0.27
LYSMD2Q8IV50 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
LYSMD2Q8IV50 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
LYSMD2Q8IV50 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LYSMD2Q8IV50 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
LYSMD2Q8IV50 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LYSMD2Q8IV50 ICOSLG-202ENST00000400377 2907 ntTSL 2 BASIC13.34□□□□□ -0.27
LYSMD2Q8IV50 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LYSMD2Q8IV50 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
LYSMD2Q8IV50 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
LYSMD2Q8IV50 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LYSMD2Q8IV50 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC13.34□□□□□ -0.27
LYSMD2Q8IV50 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
LYSMD2Q8IV50 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LYSMD2Q8IV50 CENPL-202ENST00000356198 2357 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
LYSMD2Q8IV50 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC13.34□□□□□ -0.27
LYSMD2Q8IV50 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC13.34□□□□□ -0.27
LYSMD2Q8IV50 CENPM-204ENST00000402420 688 ntTSL 5 BASIC13.34□□□□□ -0.27
LYSMD2Q8IV50 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
LYSMD2Q8IV50 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC13.34□□□□□ -0.27
LYSMD2Q8IV50 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC13.34□□□□□ -0.27
LYSMD2Q8IV50 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC13.34□□□□□ -0.27
LYSMD2Q8IV50 MOK-208ENST00000519058 917 ntTSL 2 BASIC13.34□□□□□ -0.27
LYSMD2Q8IV50 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
LYSMD2Q8IV50 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
LYSMD2Q8IV50 PAM16-215ENST00000577031 548 ntTSL 4 BASIC13.34□□□□□ -0.27
LYSMD2Q8IV50 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC13.34□□□□□ -0.27
LYSMD2Q8IV50 SPTSSB-204ENST00000617024 1292 ntBASIC13.34□□□□□ -0.27
LYSMD2Q8IV50 AC093458.2-201ENST00000623150 629 ntBASIC13.34□□□□□ -0.27
LYSMD2Q8IV50 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LYSMD2Q8IV50 AL365181.3-201ENST00000605886 3222 ntBASIC13.34□□□□□ -0.27
LYSMD2Q8IV50 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LYSMD2Q8IV50 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
LYSMD2Q8IV50 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LYSMD2Q8IV50 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LYSMD2Q8IV50 TRIM69-206ENST00000559390 2486 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
LYSMD2Q8IV50 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
LYSMD2Q8IV50 BRPF1-205ENST00000433861 4304 ntTSL 2 BASIC13.34□□□□□ -0.27
LYSMD2Q8IV50 NPNT-211ENST00000506666 2187 ntTSL 2 BASIC13.34□□□□□ -0.27
LYSMD2Q8IV50 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LYSMD2Q8IV50 CCT2-201ENST00000299300 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LYSMD2Q8IV50 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
LYSMD2Q8IV50 ADK-205ENST00000539909 1866 ntTSL 2 BASIC13.33□□□□□ -0.27
LYSMD2Q8IV50 EWSAT1-201ENST00000415504 2214 ntTSL 2 BASIC13.33□□□□□ -0.27
LYSMD2Q8IV50 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.27
LYSMD2Q8IV50 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
LYSMD2Q8IV50 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.27
LYSMD2Q8IV50 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LYSMD2Q8IV50 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
LYSMD2Q8IV50 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
LYSMD2Q8IV50 TSPEAR-AS1-202ENST00000451035 2108 ntTSL 5 BASIC13.33□□□□□ -0.28
LYSMD2Q8IV50 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
LYSMD2Q8IV50 AC012617.1-204ENST00000586340 2305 ntBASIC13.33□□□□□ -0.28
LYSMD2Q8IV50 MX1-218ENST00000619682 1980 ntTSL 5 BASIC13.33□□□□□ -0.28
LYSMD2Q8IV50 STRIP2-202ENST00000435494 2866 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
LYSMD2Q8IV50 AOC1-204ENST00000467291 2857 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
LYSMD2Q8IV50 C21orf59-203ENST00000382549 2503 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
LYSMD2Q8IV50 VENTXP1-201ENST00000569334 2716 ntBASIC13.33□□□□□ -0.28
LYSMD2Q8IV50 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LYSMD2Q8IV50 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC13.33□□□□□ -0.28
LYSMD2Q8IV50 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC13.33□□□□□ -0.28
LYSMD2Q8IV50 INIP-202ENST00000374236 874 ntTSL 2 BASIC13.33□□□□□ -0.28
LYSMD2Q8IV50 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC13.33□□□□□ -0.28
LYSMD2Q8IV50 ATP6V0CP3-201ENST00000417255 467 ntBASIC13.33□□□□□ -0.28
LYSMD2Q8IV50 HNRNPDP1-201ENST00000439535 754 ntBASIC13.33□□□□□ -0.28
LYSMD2Q8IV50 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
LYSMD2Q8IV50 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LYSMD2Q8IV50 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC13.33□□□□□ -0.28
LYSMD2Q8IV50 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC13.33□□□□□ -0.28
LYSMD2Q8IV50 RPS29-206ENST00000557111 488 ntTSL 2 BASIC13.33□□□□□ -0.28
LYSMD2Q8IV50 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC13.33□□□□□ -0.28
LYSMD2Q8IV50 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC13.33□□□□□ -0.28
LYSMD2Q8IV50 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC13.33□□□□□ -0.28
LYSMD2Q8IV50 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC13.33□□□□□ -0.28
LYSMD2Q8IV50 TBCB-205ENST00000585746 875 ntTSL 3 BASIC13.33□□□□□ -0.28
LYSMD2Q8IV50 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC13.33□□□□□ -0.28
LYSMD2Q8IV50 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC13.33□□□□□ -0.28
LYSMD2Q8IV50 C8B-201ENST00000371237 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LYSMD2Q8IV50 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
LYSMD2Q8IV50 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LYSMD2Q8IV50 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LYSMD2Q8IV50 AC244197.3-201ENST00000422081 2635 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
LYSMD2Q8IV50 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
LYSMD2Q8IV50 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
LYSMD2Q8IV50 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LYSMD2Q8IV50 AC106818.1-201ENST00000623223 3242 ntBASIC13.33□□□□□ -0.28
LYSMD2Q8IV50 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LYSMD2Q8IV50 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC13.33□□□□□ -0.28
LYSMD2Q8IV50 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 93.5 ms