Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
SCXQ7RTU7 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
SCXQ7RTU7 FASN-201ENST00000306749 8565 ntAPPRIS P2 TSL 1 (best) BASIC10.15□□□□□ -0.78
SCXQ7RTU7 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC10.15□□□□□ -0.78
SCXQ7RTU7 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC10.15□□□□□ -0.78
SCXQ7RTU7 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC10.15□□□□□ -0.78
SCXQ7RTU7 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
SCXQ7RTU7 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC10.15□□□□□ -0.78
SCXQ7RTU7 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC10.15□□□□□ -0.78
SCXQ7RTU7 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC10.15□□□□□ -0.78
SCXQ7RTU7 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
SCXQ7RTU7 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
SCXQ7RTU7 AP005117.1-202ENST00000581724 1908 ntBASIC10.15□□□□□ -0.79
SCXQ7RTU7 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
SCXQ7RTU7 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC10.15□□□□□ -0.79
SCXQ7RTU7 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC10.15□□□□□ -0.79
SCXQ7RTU7 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
SCXQ7RTU7 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
SCXQ7RTU7 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
SCXQ7RTU7 CFAP74-209ENST00000493964 5247 ntAPPRIS P5 TSL 5 BASIC10.15□□□□□ -0.79
SCXQ7RTU7 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
SCXQ7RTU7 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC10.15□□□□□ -0.79
SCXQ7RTU7 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
SCXQ7RTU7 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC10.15□□□□□ -0.79
SCXQ7RTU7 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC10.15□□□□□ -0.79
SCXQ7RTU7 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC10.15□□□□□ -0.79
SCXQ7RTU7 ZBTB11-201ENST00000312938 6020 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
SCXQ7RTU7 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC10.15□□□□□ -0.79
SCXQ7RTU7 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
SCXQ7RTU7 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC10.14□□□□□ -0.79
SCXQ7RTU7 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
SCXQ7RTU7 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
SCXQ7RTU7 UHMK1-203ENST00000538489 8446 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
SCXQ7RTU7 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC10.14□□□□□ -0.79
SCXQ7RTU7 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
SCXQ7RTU7 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC10.14□□□□□ -0.79
SCXQ7RTU7 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
SCXQ7RTU7 ME2P1-201ENST00000426028 1970 ntBASIC10.14□□□□□ -0.79
SCXQ7RTU7 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
SCXQ7RTU7 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC10.14□□□□□ -0.79
SCXQ7RTU7 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC10.14□□□□□ -0.79
SCXQ7RTU7 PRR12-201ENST00000418929 6955 ntAPPRIS P2 TSL 5 BASIC10.14□□□□□ -0.79
SCXQ7RTU7 LAMA3-202ENST00000313654 10661 ntAPPRIS P3 TSL 1 (best) BASIC10.14□□□□□ -0.79
SCXQ7RTU7 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
SCXQ7RTU7 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC10.14□□□□□ -0.79
SCXQ7RTU7 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
SCXQ7RTU7 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
SCXQ7RTU7 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC10.14□□□□□ -0.79
SCXQ7RTU7 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC10.14□□□□□ -0.79
SCXQ7RTU7 UBFD1-207ENST00000567212 4727 ntAPPRIS ALT2 TSL 2 BASIC10.14□□□□□ -0.79
SCXQ7RTU7 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC10.14□□□□□ -0.79
SCXQ7RTU7 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC10.14□□□□□ -0.79
SCXQ7RTU7 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
SCXQ7RTU7 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
SCXQ7RTU7 SON-203ENST00000381679 7860 ntTSL 5 BASIC10.14□□□□□ -0.79
SCXQ7RTU7 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
SCXQ7RTU7 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC10.14□□□□□ -0.79
SCXQ7RTU7 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC10.14□□□□□ -0.79
SCXQ7RTU7 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC10.14□□□□□ -0.79
SCXQ7RTU7 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC10.14□□□□□ -0.79
SCXQ7RTU7 FO393414.2-201ENST00000405153 598 ntBASIC10.14□□□□□ -0.79
SCXQ7RTU7 ARSEP1-201ENST00000420443 635 ntBASIC10.14□□□□□ -0.79
SCXQ7RTU7 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC10.14□□□□□ -0.79
SCXQ7RTU7 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC10.14□□□□□ -0.79
SCXQ7RTU7 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC10.14□□□□□ -0.79
SCXQ7RTU7 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC10.14□□□□□ -0.79
SCXQ7RTU7 FXR1-221ENST00000491674 365 ntTSL 2 BASIC10.14□□□□□ -0.79
SCXQ7RTU7 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
SCXQ7RTU7 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC10.14□□□□□ -0.79
SCXQ7RTU7 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC10.14□□□□□ -0.79
SCXQ7RTU7 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC10.14□□□□□ -0.79
SCXQ7RTU7 HILS1-202ENST00000545329 423 ntBASIC10.14□□□□□ -0.79
SCXQ7RTU7 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC10.14□□□□□ -0.79
SCXQ7RTU7 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC10.14□□□□□ -0.79
SCXQ7RTU7 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC10.14□□□□□ -0.79
SCXQ7RTU7 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC10.14□□□□□ -0.79
SCXQ7RTU7 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC10.14□□□□□ -0.79
SCXQ7RTU7 AC093726.1-201ENST00000608064 963 ntBASIC10.14□□□□□ -0.79
SCXQ7RTU7 AC099568.2-201ENST00000609194 695 ntBASIC10.14□□□□□ -0.79
SCXQ7RTU7 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC10.14□□□□□ -0.79
SCXQ7RTU7 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC10.14□□□□□ -0.79
SCXQ7RTU7 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
SCXQ7RTU7 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
SCXQ7RTU7 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC10.14□□□□□ -0.79
SCXQ7RTU7 NRP2-204ENST00000360409 6662 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
SCXQ7RTU7 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC10.14□□□□□ -0.79
SCXQ7RTU7 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC10.14□□□□□ -0.79
SCXQ7RTU7 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC10.14□□□□□ -0.79
SCXQ7RTU7 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC10.14□□□□□ -0.79
SCXQ7RTU7 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC10.14□□□□□ -0.79
SCXQ7RTU7 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
SCXQ7RTU7 CACNA1G-233ENST00000515765 6981 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
SCXQ7RTU7 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC10.14□□□□□ -0.79
SCXQ7RTU7 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC10.14□□□□□ -0.79
SCXQ7RTU7 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC10.14□□□□□ -0.79
SCXQ7RTU7 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC10.14□□□□□ -0.79
SCXQ7RTU7 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC10.14□□□□□ -0.79
SCXQ7RTU7 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
SCXQ7RTU7 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC10.14□□□□□ -0.79
SCXQ7RTU7 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms