Protein–RNA interactions for Protein: Q7L0R7

RNF44, RING finger protein 44, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF44Q7L0R7 KRT90P-201ENST00000549264 1064 ntBASIC14.55□□□□□ -0.08
RNF44Q7L0R7 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC14.55□□□□□ -0.08
RNF44Q7L0R7 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC14.55□□□□□ -0.08
RNF44Q7L0R7 AL354718.3-201ENST00000616414 581 ntBASIC14.55□□□□□ -0.08
RNF44Q7L0R7 CR382287.1-201ENST00000623954 586 ntBASIC14.55□□□□□ -0.08
RNF44Q7L0R7 PFAS-212ENST00000625942 396 ntTSL 5 BASIC14.55□□□□□ -0.08
RNF44Q7L0R7 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC14.55□□□□□ -0.08
RNF44Q7L0R7 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC14.55□□□□□ -0.08
RNF44Q7L0R7 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC14.55□□□□□ -0.08
RNF44Q7L0R7 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
RNF44Q7L0R7 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RNF44Q7L0R7 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
RNF44Q7L0R7 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RNF44Q7L0R7 FOS-202ENST00000535987 1402 ntTSL 2 BASIC14.55□□□□□ -0.08
RNF44Q7L0R7 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
RNF44Q7L0R7 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC14.55□□□□□ -0.08
RNF44Q7L0R7 PDIA3P1-201ENST00000471856 1510 ntBASIC14.55□□□□□ -0.08
RNF44Q7L0R7 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
RNF44Q7L0R7 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RNF44Q7L0R7 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
RNF44Q7L0R7 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
RNF44Q7L0R7 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
RNF44Q7L0R7 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC14.55□□□□□ -0.08
RNF44Q7L0R7 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
RNF44Q7L0R7 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RNF44Q7L0R7 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
RNF44Q7L0R7 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
RNF44Q7L0R7 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC14.54□□□□□ -0.08
RNF44Q7L0R7 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
RNF44Q7L0R7 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC14.54□□□□□ -0.08
RNF44Q7L0R7 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
RNF44Q7L0R7 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
RNF44Q7L0R7 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC14.54□□□□□ -0.08
RNF44Q7L0R7 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
RNF44Q7L0R7 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
RNF44Q7L0R7 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
RNF44Q7L0R7 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
RNF44Q7L0R7 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
RNF44Q7L0R7 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
RNF44Q7L0R7 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC14.54□□□□□ -0.08
RNF44Q7L0R7 MIR1909-201ENST00000411312 80 ntBASIC14.54□□□□□ -0.08
RNF44Q7L0R7 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC14.54□□□□□ -0.08
RNF44Q7L0R7 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
RNF44Q7L0R7 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC14.54□□□□□ -0.08
RNF44Q7L0R7 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC14.54□□□□□ -0.08
RNF44Q7L0R7 AC007551.1-201ENST00000457394 519 ntBASIC14.54□□□□□ -0.08
RNF44Q7L0R7 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC14.54□□□□□ -0.08
RNF44Q7L0R7 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC14.54□□□□□ -0.08
RNF44Q7L0R7 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC14.54□□□□□ -0.08
RNF44Q7L0R7 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC14.54□□□□□ -0.08
RNF44Q7L0R7 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC14.54□□□□□ -0.08
RNF44Q7L0R7 RN7SL48P-201ENST00000579283 293 ntBASIC14.54□□□□□ -0.08
RNF44Q7L0R7 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC14.54□□□□□ -0.08
RNF44Q7L0R7 AC244669.2-201ENST00000612320 853 ntBASIC14.54□□□□□ -0.08
RNF44Q7L0R7 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
RNF44Q7L0R7 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC14.54□□□□□ -0.08
RNF44Q7L0R7 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RNF44Q7L0R7 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC14.54□□□□□ -0.08
RNF44Q7L0R7 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC14.54□□□□□ -0.08
RNF44Q7L0R7 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
RNF44Q7L0R7 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
RNF44Q7L0R7 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RNF44Q7L0R7 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
RNF44Q7L0R7 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
RNF44Q7L0R7 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC14.54□□□□□ -0.08
RNF44Q7L0R7 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RNF44Q7L0R7 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
RNF44Q7L0R7 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RNF44Q7L0R7 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RNF44Q7L0R7 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
RNF44Q7L0R7 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC14.54□□□□□ -0.08
RNF44Q7L0R7 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
RNF44Q7L0R7 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
RNF44Q7L0R7 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RNF44Q7L0R7 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
RNF44Q7L0R7 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RNF44Q7L0R7 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RNF44Q7L0R7 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
RNF44Q7L0R7 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
RNF44Q7L0R7 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC14.53□□□□□ -0.08
RNF44Q7L0R7 AC006486.2-201ENST00000624246 2199 ntBASIC14.53□□□□□ -0.08
RNF44Q7L0R7 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
RNF44Q7L0R7 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RNF44Q7L0R7 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RNF44Q7L0R7 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
RNF44Q7L0R7 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC14.53□□□□□ -0.08
RNF44Q7L0R7 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RNF44Q7L0R7 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RNF44Q7L0R7 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RNF44Q7L0R7 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RNF44Q7L0R7 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
RNF44Q7L0R7 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RNF44Q7L0R7 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RNF44Q7L0R7 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC14.53□□□□□ -0.08
RNF44Q7L0R7 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC14.53□□□□□ -0.08
RNF44Q7L0R7 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RNF44Q7L0R7 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
RNF44Q7L0R7 USB1-202ENST00000423271 1217 ntTSL 2 BASIC14.53□□□□□ -0.08
RNF44Q7L0R7 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC14.53□□□□□ -0.08
RNF44Q7L0R7 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC14.53□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms