Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 CDC45-205ENST00000437685 2072 ntTSL 2 BASIC14.03□□□□□ -0.16
TMEM53Q6P2H8 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TMEM53Q6P2H8 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC14.03□□□□□ -0.16
TMEM53Q6P2H8 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
TMEM53Q6P2H8 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC14.03□□□□□ -0.16
TMEM53Q6P2H8 FGD5P1-202ENST00000614866 2498 ntBASIC14.03□□□□□ -0.16
TMEM53Q6P2H8 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC14.03□□□□□ -0.16
TMEM53Q6P2H8 MAP7-205ENST00000544465 2744 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
TMEM53Q6P2H8 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
TMEM53Q6P2H8 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC14.03□□□□□ -0.16
TMEM53Q6P2H8 WIZ-202ENST00000389282 4067 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TMEM53Q6P2H8 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
TMEM53Q6P2H8 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TMEM53Q6P2H8 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TMEM53Q6P2H8 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC14.02□□□□□ -0.16
TMEM53Q6P2H8 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
TMEM53Q6P2H8 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
TMEM53Q6P2H8 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TMEM53Q6P2H8 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC14.02□□□□□ -0.16
TMEM53Q6P2H8 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC14.02□□□□□ -0.16
TMEM53Q6P2H8 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
TMEM53Q6P2H8 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
TMEM53Q6P2H8 MEST-206ENST00000416162 2158 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
TMEM53Q6P2H8 CETN4P-206ENST00000642099 2168 ntBASIC14.02□□□□□ -0.16
TMEM53Q6P2H8 PIM2-201ENST00000376509 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TMEM53Q6P2H8 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC14.02□□□□□ -0.16
TMEM53Q6P2H8 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC14.02□□□□□ -0.16
TMEM53Q6P2H8 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
TMEM53Q6P2H8 AC011477.6-201ENST00000604980 1927 ntBASIC14.02□□□□□ -0.16
TMEM53Q6P2H8 AL591122.2-201ENST00000624125 1853 ntBASIC14.02□□□□□ -0.16
TMEM53Q6P2H8 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
TMEM53Q6P2H8 AL359881.3-201ENST00000602640 1721 ntBASIC14.02□□□□□ -0.16
TMEM53Q6P2H8 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
TMEM53Q6P2H8 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC14.02□□□□□ -0.16
TMEM53Q6P2H8 CYP4F24P-201ENST00000586049 1580 ntBASIC14.02□□□□□ -0.16
TMEM53Q6P2H8 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
TMEM53Q6P2H8 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
TMEM53Q6P2H8 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
TMEM53Q6P2H8 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TMEM53Q6P2H8 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
TMEM53Q6P2H8 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
TMEM53Q6P2H8 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TMEM53Q6P2H8 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
TMEM53Q6P2H8 RBM39-205ENST00000397370 612 ntTSL 2 BASIC14.02□□□□□ -0.17
TMEM53Q6P2H8 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC14.02□□□□□ -0.17
TMEM53Q6P2H8 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TMEM53Q6P2H8 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TMEM53Q6P2H8 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TMEM53Q6P2H8 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC14.02□□□□□ -0.17
TMEM53Q6P2H8 AC125807.1-201ENST00000483097 614 ntBASIC14.02□□□□□ -0.17
TMEM53Q6P2H8 SLBP-205ENST00000488267 987 ntTSL 2 BASIC14.02□□□□□ -0.17
TMEM53Q6P2H8 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC14.02□□□□□ -0.17
TMEM53Q6P2H8 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC14.02□□□□□ -0.17
TMEM53Q6P2H8 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC14.02□□□□□ -0.17
TMEM53Q6P2H8 AL589739.1-201ENST00000607720 493 ntBASIC14.02□□□□□ -0.17
TMEM53Q6P2H8 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
TMEM53Q6P2H8 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC14.02□□□□□ -0.17
TMEM53Q6P2H8 AC093028.1-201ENST00000622998 982 ntBASIC14.02□□□□□ -0.17
TMEM53Q6P2H8 LOXL4-201ENST00000260702 3653 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TMEM53Q6P2H8 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
TMEM53Q6P2H8 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
TMEM53Q6P2H8 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TMEM53Q6P2H8 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
TMEM53Q6P2H8 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC14.02□□□□□ -0.17
TMEM53Q6P2H8 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TMEM53Q6P2H8 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
TMEM53Q6P2H8 AC015909.5-201ENST00000624336 2266 ntBASIC14.02□□□□□ -0.17
TMEM53Q6P2H8 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TMEM53Q6P2H8 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
TMEM53Q6P2H8 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
TMEM53Q6P2H8 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
TMEM53Q6P2H8 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC14.02□□□□□ -0.17
TMEM53Q6P2H8 DKFZP434H168-201ENST00000567381 1905 ntBASIC14.02□□□□□ -0.17
TMEM53Q6P2H8 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC14.02□□□□□ -0.17
TMEM53Q6P2H8 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
TMEM53Q6P2H8 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
TMEM53Q6P2H8 SPATS2-201ENST00000321898 3158 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TMEM53Q6P2H8 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TMEM53Q6P2H8 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
TMEM53Q6P2H8 NCSTN-202ENST00000368063 3031 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TMEM53Q6P2H8 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TMEM53Q6P2H8 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC14.01□□□□□ -0.17
TMEM53Q6P2H8 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC14.01□□□□□ -0.17
TMEM53Q6P2H8 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TMEM53Q6P2H8 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC14.01□□□□□ -0.17
TMEM53Q6P2H8 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
TMEM53Q6P2H8 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TMEM53Q6P2H8 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
TMEM53Q6P2H8 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TMEM53Q6P2H8 AC040174.1-201ENST00000563003 2571 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TMEM53Q6P2H8 ATXN2L-215ENST00000564304 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
TMEM53Q6P2H8 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC14.01□□□□□ -0.17
TMEM53Q6P2H8 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TMEM53Q6P2H8 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TMEM53Q6P2H8 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TMEM53Q6P2H8 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
TMEM53Q6P2H8 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TMEM53Q6P2H8 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TMEM53Q6P2H8 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
TMEM53Q6P2H8 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms