Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC9.84□□□□□ -0.83
VPS13DQ5THJ4 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC9.84□□□□□ -0.83
VPS13DQ5THJ4 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC9.84□□□□□ -0.83
VPS13DQ5THJ4 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC9.84□□□□□ -0.83
VPS13DQ5THJ4 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC9.84□□□□□ -0.83
VPS13DQ5THJ4 GTF3C6-201ENST00000329970 952 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
VPS13DQ5THJ4 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC9.84□□□□□ -0.83
VPS13DQ5THJ4 AC156455.1-203ENST00000423999 893 ntTSL 2 BASIC9.84□□□□□ -0.83
VPS13DQ5THJ4 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC9.84□□□□□ -0.83
VPS13DQ5THJ4 AC013448.2-201ENST00000440341 787 ntTSL 5 BASIC9.84□□□□□ -0.83
VPS13DQ5THJ4 BRI3P1-201ENST00000440440 378 ntBASIC9.84□□□□□ -0.83
VPS13DQ5THJ4 AC004837.1-201ENST00000446267 564 ntBASIC9.84□□□□□ -0.83
VPS13DQ5THJ4 PRRC2B-207ENST00000458550 899 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
VPS13DQ5THJ4 AC105390.1-201ENST00000511330 560 ntTSL 4 BASIC9.84□□□□□ -0.83
VPS13DQ5THJ4 ANO3-205ENST00000531646 1264 ntTSL 4 BASIC9.84□□□□□ -0.83
VPS13DQ5THJ4 TPM1-220ENST00000559556 977 ntAPPRIS ALT1 TSL 2 BASIC9.84□□□□□ -0.83
VPS13DQ5THJ4 AP001029.1-201ENST00000589843 168 ntTSL 3 BASIC9.84□□□□□ -0.83
VPS13DQ5THJ4 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC9.84□□□□□ -0.83
VPS13DQ5THJ4 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
VPS13DQ5THJ4 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC9.84□□□□□ -0.83
VPS13DQ5THJ4 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
VPS13DQ5THJ4 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC9.84□□□□□ -0.83
VPS13DQ5THJ4 SCAF11-203ENST00000395453 1336 ntAPPRIS ALT2 TSL 2 BASIC9.84□□□□□ -0.83
VPS13DQ5THJ4 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
VPS13DQ5THJ4 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
VPS13DQ5THJ4 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC9.84□□□□□ -0.83
VPS13DQ5THJ4 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC9.84□□□□□ -0.83
VPS13DQ5THJ4 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
VPS13DQ5THJ4 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
VPS13DQ5THJ4 RPL10-202ENST00000369817 1284 ntAPPRIS P1 TSL 5 BASIC9.84□□□□□ -0.83
VPS13DQ5THJ4 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC9.84□□□□□ -0.83
VPS13DQ5THJ4 OR8T1P-201ENST00000421347 918 ntBASIC9.84□□□□□ -0.83
VPS13DQ5THJ4 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC9.84□□□□□ -0.83
VPS13DQ5THJ4 CHCHD2P9-201ENST00000461726 456 ntBASIC9.84□□□□□ -0.83
VPS13DQ5THJ4 TMEM126A-203ENST00000528105 656 ntTSL 2 BASIC9.84□□□□□ -0.83
VPS13DQ5THJ4 RAP1B-216ENST00000537460 1072 ntAPPRIS P1 TSL 5 BASIC9.84□□□□□ -0.83
VPS13DQ5THJ4 DNAJB13-203ENST00000537753 912 ntTSL 3 BASIC9.84□□□□□ -0.83
VPS13DQ5THJ4 NAA40-205ENST00000539656 577 ntTSL 4 BASIC9.84□□□□□ -0.83
VPS13DQ5THJ4 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC9.84□□□□□ -0.83
VPS13DQ5THJ4 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
VPS13DQ5THJ4 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
VPS13DQ5THJ4 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
VPS13DQ5THJ4 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
VPS13DQ5THJ4 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
VPS13DQ5THJ4 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
VPS13DQ5THJ4 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC9.83□□□□□ -0.84
VPS13DQ5THJ4 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
VPS13DQ5THJ4 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
VPS13DQ5THJ4 COX20P1-201ENST00000366529 357 ntBASIC9.83□□□□□ -0.84
VPS13DQ5THJ4 RN7SL277P-201ENST00000481521 288 ntBASIC9.83□□□□□ -0.84
VPS13DQ5THJ4 RN7SL81P-201ENST00000493781 261 ntBASIC9.83□□□□□ -0.84
VPS13DQ5THJ4 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC9.83□□□□□ -0.84
VPS13DQ5THJ4 AC136624.2-201ENST00000574883 542 ntTSL 3 BASIC9.83□□□□□ -0.84
VPS13DQ5THJ4 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
VPS13DQ5THJ4 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
VPS13DQ5THJ4 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
VPS13DQ5THJ4 LINC02021-201ENST00000504808 1608 ntTSL 3 BASIC9.83□□□□□ -0.84
VPS13DQ5THJ4 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC9.83□□□□□ -0.84
VPS13DQ5THJ4 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC9.83□□□□□ -0.84
VPS13DQ5THJ4 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC9.83□□□□□ -0.84
VPS13DQ5THJ4 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC9.83□□□□□ -0.84
VPS13DQ5THJ4 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
VPS13DQ5THJ4 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC9.83□□□□□ -0.84
VPS13DQ5THJ4 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC9.83□□□□□ -0.84
VPS13DQ5THJ4 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC9.83□□□□□ -0.84
VPS13DQ5THJ4 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
VPS13DQ5THJ4 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
VPS13DQ5THJ4 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
VPS13DQ5THJ4 OBSCN-AS1-201ENST00000295012 889 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
VPS13DQ5THJ4 CST1-201ENST00000304749 760 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
VPS13DQ5THJ4 OR2V1-201ENST00000329365 948 ntAPPRIS P1 BASIC9.83□□□□□ -0.84
VPS13DQ5THJ4 APOA1-203ENST00000375320 940 ntAPPRIS P1 TSL 3 BASIC9.83□□□□□ -0.84
VPS13DQ5THJ4 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
VPS13DQ5THJ4 LINC00313-207ENST00000451543 413 ntTSL 3 BASIC9.83□□□□□ -0.84
VPS13DQ5THJ4 LINC01669-201ENST00000623161 413 ntTSL 3 BASIC9.83□□□□□ -0.84
VPS13DQ5THJ4 AC011451.3-201ENST00000634951 582 ntTSL 3 BASIC9.83□□□□□ -0.84
VPS13DQ5THJ4 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
VPS13DQ5THJ4 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
VPS13DQ5THJ4 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
VPS13DQ5THJ4 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC9.83□□□□□ -0.84
VPS13DQ5THJ4 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
VPS13DQ5THJ4 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC9.83□□□□□ -0.84
VPS13DQ5THJ4 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC9.83□□□□□ -0.84
VPS13DQ5THJ4 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
VPS13DQ5THJ4 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
VPS13DQ5THJ4 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC9.83□□□□□ -0.84
VPS13DQ5THJ4 HIST1H1D-201ENST00000244534 666 ntAPPRIS P1 BASIC9.83□□□□□ -0.84
VPS13DQ5THJ4 LCE3B-201ENST00000335633 288 ntAPPRIS P1 BASIC9.83□□□□□ -0.84
VPS13DQ5THJ4 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
VPS13DQ5THJ4 AP003398.1-201ENST00000531124 318 ntBASIC9.83□□□□□ -0.84
VPS13DQ5THJ4 TMBIM4-208ENST00000542724 770 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
VPS13DQ5THJ4 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC9.83□□□□□ -0.84
VPS13DQ5THJ4 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC9.83□□□□□ -0.84
VPS13DQ5THJ4 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
VPS13DQ5THJ4 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
VPS13DQ5THJ4 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
VPS13DQ5THJ4 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC9.83□□□□□ -0.84
VPS13DQ5THJ4 SHANK2-202ENST00000357171 1373 ntTSL 5 BASIC9.83□□□□□ -0.84
VPS13DQ5THJ4 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
VPS13DQ5THJ4 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms