Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 KC6-205ENST00000599934 556 ntTSL 4 BASIC16.03■□□□□ 0.16
VARS2Q5ST30 KLK11-210ENST00000600362 759 ntTSL 3 BASIC16.03■□□□□ 0.16
VARS2Q5ST30 AL021578.1-201ENST00000613646 709 ntBASIC16.03■□□□□ 0.16
VARS2Q5ST30 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC16.03■□□□□ 0.16
VARS2Q5ST30 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
VARS2Q5ST30 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC16.03■□□□□ 0.16
VARS2Q5ST30 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
VARS2Q5ST30 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC16.03■□□□□ 0.16
VARS2Q5ST30 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
VARS2Q5ST30 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
VARS2Q5ST30 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
VARS2Q5ST30 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
VARS2Q5ST30 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
VARS2Q5ST30 AP000593.2-201ENST00000542775 1433 ntBASIC16.02■□□□□ 0.16
VARS2Q5ST30 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC16.02■□□□□ 0.16
VARS2Q5ST30 PAUPAR-201ENST00000630360 2965 ntBASIC16.02■□□□□ 0.16
VARS2Q5ST30 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
VARS2Q5ST30 GSN-206ENST00000394353 2311 ntTSL 2 BASIC16.02■□□□□ 0.16
VARS2Q5ST30 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
VARS2Q5ST30 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
VARS2Q5ST30 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
VARS2Q5ST30 AC023024.2-201ENST00000623561 1993 ntBASIC16.02■□□□□ 0.16
VARS2Q5ST30 SSR4P1-203ENST00000599569 2260 ntBASIC16.02■□□□□ 0.16
VARS2Q5ST30 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
VARS2Q5ST30 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC16.02■□□□□ 0.16
VARS2Q5ST30 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC16.02■□□□□ 0.16
VARS2Q5ST30 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
VARS2Q5ST30 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
VARS2Q5ST30 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
VARS2Q5ST30 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
VARS2Q5ST30 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC16.02■□□□□ 0.16
VARS2Q5ST30 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
VARS2Q5ST30 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
VARS2Q5ST30 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
VARS2Q5ST30 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
VARS2Q5ST30 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC16.02■□□□□ 0.16
VARS2Q5ST30 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
VARS2Q5ST30 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
VARS2Q5ST30 HNRNPA1P32-201ENST00000396326 963 ntBASIC16.02■□□□□ 0.16
VARS2Q5ST30 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
VARS2Q5ST30 AL157938.2-207ENST00000415391 884 ntTSL 2 BASIC16.02■□□□□ 0.16
VARS2Q5ST30 CALR4P-201ENST00000431943 946 ntBASIC16.02■□□□□ 0.16
VARS2Q5ST30 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC16.02■□□□□ 0.16
VARS2Q5ST30 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
VARS2Q5ST30 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
VARS2Q5ST30 ARTN-209ENST00000479128 471 ntTSL 3 BASIC16.02■□□□□ 0.16
VARS2Q5ST30 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
VARS2Q5ST30 AC091804.1-201ENST00000486888 567 ntBASIC16.02■□□□□ 0.16
VARS2Q5ST30 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
VARS2Q5ST30 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC16.02■□□□□ 0.16
VARS2Q5ST30 MIR4683-201ENST00000579659 81 ntBASIC16.02■□□□□ 0.16
VARS2Q5ST30 AP000845.1-201ENST00000581677 2131 ntBASIC16.02■□□□□ 0.16
VARS2Q5ST30 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC16.02■□□□□ 0.16
VARS2Q5ST30 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC16.02■□□□□ 0.16
VARS2Q5ST30 SNX1-214ENST00000625244 324 ntTSL 5 BASIC16.02■□□□□ 0.16
VARS2Q5ST30 AC244452.3-201ENST00000636814 210 ntBASIC16.02■□□□□ 0.16
VARS2Q5ST30 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
VARS2Q5ST30 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
VARS2Q5ST30 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
VARS2Q5ST30 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC16.02■□□□□ 0.16
VARS2Q5ST30 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
VARS2Q5ST30 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
VARS2Q5ST30 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
VARS2Q5ST30 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC16.02■□□□□ 0.15
VARS2Q5ST30 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
VARS2Q5ST30 AC007950.2-201ENST00000615045 2347 ntBASIC16.02■□□□□ 0.15
VARS2Q5ST30 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
VARS2Q5ST30 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
VARS2Q5ST30 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
VARS2Q5ST30 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
VARS2Q5ST30 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC16.02■□□□□ 0.15
VARS2Q5ST30 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
VARS2Q5ST30 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
VARS2Q5ST30 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
VARS2Q5ST30 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
VARS2Q5ST30 TMBIM7P-203ENST00000641617 1718 ntBASIC16.02■□□□□ 0.15
VARS2Q5ST30 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
VARS2Q5ST30 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
VARS2Q5ST30 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC16.02■□□□□ 0.15
VARS2Q5ST30 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC16.02■□□□□ 0.15
VARS2Q5ST30 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
VARS2Q5ST30 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
VARS2Q5ST30 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC16.01■□□□□ 0.15
VARS2Q5ST30 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
VARS2Q5ST30 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
VARS2Q5ST30 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
VARS2Q5ST30 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
VARS2Q5ST30 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
VARS2Q5ST30 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
VARS2Q5ST30 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
VARS2Q5ST30 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC16.01■□□□□ 0.15
VARS2Q5ST30 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
VARS2Q5ST30 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
VARS2Q5ST30 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
VARS2Q5ST30 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
VARS2Q5ST30 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC16.01■□□□□ 0.15
VARS2Q5ST30 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC16.01■□□□□ 0.15
VARS2Q5ST30 AC087272.1-201ENST00000523624 533 ntBASIC16.01■□□□□ 0.15
VARS2Q5ST30 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC16.01■□□□□ 0.15
VARS2Q5ST30 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 65.6 ms