Protein–RNA interactions for Protein: Q12772

SREBF2, Sterol regulatory element-binding protein 2, humanhuman

Predictions only

Length 1,141 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF2Q12772 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
SREBF2Q12772 SALL4P5-201ENST00000419001 1760 ntBASIC17.02■□□□□ 0.31
SREBF2Q12772 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SREBF2Q12772 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SREBF2Q12772 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SREBF2Q12772 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC17.02■□□□□ 0.31
SREBF2Q12772 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
SREBF2Q12772 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
SREBF2Q12772 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC17.01■□□□□ 0.31
SREBF2Q12772 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SREBF2Q12772 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
SREBF2Q12772 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC17.01■□□□□ 0.31
SREBF2Q12772 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC17.01■□□□□ 0.31
SREBF2Q12772 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SREBF2Q12772 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC17.01■□□□□ 0.31
SREBF2Q12772 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
SREBF2Q12772 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
SREBF2Q12772 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SREBF2Q12772 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC17.01■□□□□ 0.31
SREBF2Q12772 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
SREBF2Q12772 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC17.01■□□□□ 0.31
SREBF2Q12772 CCDC51-206ENST00000447018 1461 ntTSL 2 BASIC17.01■□□□□ 0.31
SREBF2Q12772 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC17.01■□□□□ 0.31
SREBF2Q12772 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC17.01■□□□□ 0.31
SREBF2Q12772 POLR2L-201ENST00000322028 892 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SREBF2Q12772 COX20P1-201ENST00000366529 357 ntBASIC17.01■□□□□ 0.31
SREBF2Q12772 PMF1-202ENST00000368277 1068 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SREBF2Q12772 SLC50A1-202ENST00000368401 1166 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SREBF2Q12772 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
SREBF2Q12772 AGGF1P2-201ENST00000426656 2106 ntBASIC17.01■□□□□ 0.31
SREBF2Q12772 AQP7P5-201ENST00000428759 1049 ntBASIC17.01■□□□□ 0.31
SREBF2Q12772 RPL35P9-201ENST00000446059 350 ntBASIC17.01■□□□□ 0.31
SREBF2Q12772 AQP7P4-201ENST00000447083 1042 ntBASIC17.01■□□□□ 0.31
SREBF2Q12772 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SREBF2Q12772 AQP7P2-201ENST00000453967 1041 ntBASIC17.01■□□□□ 0.31
SREBF2Q12772 OR2T27-202ENST00000460972 1136 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
SREBF2Q12772 ATP1A4-205ENST00000470705 886 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SREBF2Q12772 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
SREBF2Q12772 GCOM2-201ENST00000509133 1104 ntBASIC17.01■□□□□ 0.31
SREBF2Q12772 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC17.01■□□□□ 0.31
SREBF2Q12772 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC17.01■□□□□ 0.31
SREBF2Q12772 AC055811.3-201ENST00000584952 686 ntBASIC17.01■□□□□ 0.31
SREBF2Q12772 PEBP1P2-201ENST00000603980 558 ntBASIC17.01■□□□□ 0.31
SREBF2Q12772 AQP7P3-201ENST00000624547 1041 ntBASIC17.01■□□□□ 0.31
SREBF2Q12772 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC17.01■□□□□ 0.31
SREBF2Q12772 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SREBF2Q12772 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC17.01■□□□□ 0.31
SREBF2Q12772 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
SREBF2Q12772 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SREBF2Q12772 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SREBF2Q12772 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC17.01■□□□□ 0.31
SREBF2Q12772 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SREBF2Q12772 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SREBF2Q12772 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC17.01■□□□□ 0.31
SREBF2Q12772 AC112504.1-201ENST00000623415 1841 ntBASIC17■□□□□ 0.31
SREBF2Q12772 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
SREBF2Q12772 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
SREBF2Q12772 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
SREBF2Q12772 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC17■□□□□ 0.31
SREBF2Q12772 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC17■□□□□ 0.31
SREBF2Q12772 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC17■□□□□ 0.31
SREBF2Q12772 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SREBF2Q12772 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
SREBF2Q12772 FAS-202ENST00000352159 1722 ntTSL 5 BASIC17■□□□□ 0.31
SREBF2Q12772 BGLAP-201ENST00000368272 732 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SREBF2Q12772 CXCL12-205ENST00000395794 1052 ntTSL 1 (best) BASIC17■□□□□ 0.31
SREBF2Q12772 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC17■□□□□ 0.31
SREBF2Q12772 SH3BGR-209ENST00000458295 812 ntTSL 3 BASIC17■□□□□ 0.31
SREBF2Q12772 FXYD6-FXYD2-201ENST00000532984 670 ntTSL 3 BASIC17■□□□□ 0.31
SREBF2Q12772 HIST2H2BF-204ENST00000545683 999 ntTSL 2 BASIC17■□□□□ 0.31
SREBF2Q12772 ANAPC15-217ENST00000545944 704 ntAPPRIS P3 TSL 3 BASIC17■□□□□ 0.31
SREBF2Q12772 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC17■□□□□ 0.31
SREBF2Q12772 AP001029.1-201ENST00000589843 168 ntTSL 3 BASIC17■□□□□ 0.31
SREBF2Q12772 AC140113.1-201ENST00000603467 169 ntBASIC17■□□□□ 0.31
SREBF2Q12772 AL022334.2-201ENST00000610000 484 ntBASIC17■□□□□ 0.31
SREBF2Q12772 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SREBF2Q12772 AC092127.1-201ENST00000567093 3455 ntBASIC17■□□□□ 0.31
SREBF2Q12772 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SREBF2Q12772 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SREBF2Q12772 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
SREBF2Q12772 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
SREBF2Q12772 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SREBF2Q12772 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
SREBF2Q12772 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC17■□□□□ 0.31
SREBF2Q12772 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SREBF2Q12772 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC17■□□□□ 0.31
SREBF2Q12772 TMBIM7P-202ENST00000641474 1516 ntBASIC17■□□□□ 0.31
SREBF2Q12772 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC17■□□□□ 0.31
SREBF2Q12772 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
SREBF2Q12772 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
SREBF2Q12772 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SREBF2Q12772 AC012313.1-201ENST00000593393 3059 ntBASIC16.99■□□□□ 0.31
SREBF2Q12772 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SREBF2Q12772 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SREBF2Q12772 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
SREBF2Q12772 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
SREBF2Q12772 CMTM5-202ENST00000342473 725 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SREBF2Q12772 MAGOH-202ENST00000371470 756 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SREBF2Q12772 C11orf49-203ENST00000378618 1166 ntTSL 5 BASIC16.99■□□□□ 0.31
SREBF2Q12772 MAPK3-204ENST00000395200 997 ntTSL 3 BASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms