Protein–RNA interactions for Protein: Q04837

SSBP1, Single-stranded DNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1Q04837 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
SSBP1Q04837 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
SSBP1Q04837 CETP-203ENST00000566128 1733 ntTSL 5 BASIC12.84□□□□□ -0.35
SSBP1Q04837 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
SSBP1Q04837 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC12.84□□□□□ -0.35
SSBP1Q04837 ADK-205ENST00000539909 1866 ntTSL 2 BASIC12.84□□□□□ -0.35
SSBP1Q04837 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
SSBP1Q04837 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
SSBP1Q04837 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
SSBP1Q04837 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
SSBP1Q04837 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
SSBP1Q04837 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
SSBP1Q04837 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
SSBP1Q04837 CICP20-201ENST00000443330 2801 ntBASIC12.84□□□□□ -0.35
SSBP1Q04837 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
SSBP1Q04837 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
SSBP1Q04837 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC12.83□□□□□ -0.35
SSBP1Q04837 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.35
SSBP1Q04837 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC12.83□□□□□ -0.35
SSBP1Q04837 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC12.83□□□□□ -0.35
SSBP1Q04837 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
SSBP1Q04837 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.35
SSBP1Q04837 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
SSBP1Q04837 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC12.83□□□□□ -0.35
SSBP1Q04837 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC12.83□□□□□ -0.36
SSBP1Q04837 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SSBP1Q04837 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
SSBP1Q04837 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SSBP1Q04837 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
SSBP1Q04837 AC023794.5-201ENST00000564380 2157 ntBASIC12.83□□□□□ -0.36
SSBP1Q04837 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SSBP1Q04837 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
SSBP1Q04837 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC12.83□□□□□ -0.36
SSBP1Q04837 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
SSBP1Q04837 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
SSBP1Q04837 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC12.83□□□□□ -0.36
SSBP1Q04837 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SSBP1Q04837 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
SSBP1Q04837 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
SSBP1Q04837 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SSBP1Q04837 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
SSBP1Q04837 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SSBP1Q04837 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
SSBP1Q04837 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SSBP1Q04837 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SSBP1Q04837 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC12.83□□□□□ -0.36
SSBP1Q04837 AL031284.1-201ENST00000419297 478 ntBASIC12.83□□□□□ -0.36
SSBP1Q04837 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.36
SSBP1Q04837 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC12.83□□□□□ -0.36
SSBP1Q04837 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC12.83□□□□□ -0.36
SSBP1Q04837 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC12.83□□□□□ -0.36
SSBP1Q04837 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
SSBP1Q04837 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC12.83□□□□□ -0.36
SSBP1Q04837 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SSBP1Q04837 RARRES2P9-201ENST00000565168 469 ntBASIC12.83□□□□□ -0.36
SSBP1Q04837 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC12.83□□□□□ -0.36
SSBP1Q04837 AC018845.2-201ENST00000568326 409 ntBASIC12.83□□□□□ -0.36
SSBP1Q04837 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC12.83□□□□□ -0.36
SSBP1Q04837 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC12.83□□□□□ -0.36
SSBP1Q04837 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC12.83□□□□□ -0.36
SSBP1Q04837 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC12.83□□□□□ -0.36
SSBP1Q04837 AC064836.3-201ENST00000607928 673 ntBASIC12.83□□□□□ -0.36
SSBP1Q04837 Z83851.2-201ENST00000609564 659 ntBASIC12.83□□□□□ -0.36
SSBP1Q04837 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC12.83□□□□□ -0.36
SSBP1Q04837 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SSBP1Q04837 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
SSBP1Q04837 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.36
SSBP1Q04837 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC12.83□□□□□ -0.36
SSBP1Q04837 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
SSBP1Q04837 AC099521.3-201ENST00000624251 2938 ntBASIC12.83□□□□□ -0.36
SSBP1Q04837 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC12.83□□□□□ -0.36
SSBP1Q04837 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC12.83□□□□□ -0.36
SSBP1Q04837 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SSBP1Q04837 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SSBP1Q04837 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC12.83□□□□□ -0.36
SSBP1Q04837 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
SSBP1Q04837 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC12.83□□□□□ -0.36
SSBP1Q04837 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SSBP1Q04837 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC12.83□□□□□ -0.36
SSBP1Q04837 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SSBP1Q04837 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
SSBP1Q04837 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SSBP1Q04837 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SSBP1Q04837 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SSBP1Q04837 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC12.83□□□□□ -0.36
SSBP1Q04837 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC12.83□□□□□ -0.36
SSBP1Q04837 AC011840.2-201ENST00000563063 1520 ntBASIC12.83□□□□□ -0.36
SSBP1Q04837 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
SSBP1Q04837 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SSBP1Q04837 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SSBP1Q04837 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SSBP1Q04837 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
SSBP1Q04837 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC12.82□□□□□ -0.36
SSBP1Q04837 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
SSBP1Q04837 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SSBP1Q04837 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
SSBP1Q04837 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
SSBP1Q04837 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SSBP1Q04837 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
SSBP1Q04837 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC12.82□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 73.2 ms