Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
HIST1H1AQ02539 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
HIST1H1AQ02539 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC11.7□□□□□ -0.54
HIST1H1AQ02539 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
HIST1H1AQ02539 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC11.7□□□□□ -0.54
HIST1H1AQ02539 CEMIP-202ENST00000356249 7297 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
HIST1H1AQ02539 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC11.7□□□□□ -0.54
HIST1H1AQ02539 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC11.7□□□□□ -0.54
HIST1H1AQ02539 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
HIST1H1AQ02539 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC11.7□□□□□ -0.54
HIST1H1AQ02539 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
HIST1H1AQ02539 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
HIST1H1AQ02539 KRT8P12-202ENST00000472924 1397 ntBASIC11.7□□□□□ -0.54
HIST1H1AQ02539 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
HIST1H1AQ02539 GOLGA6L17P-202ENST00000614358 1398 ntBASIC11.7□□□□□ -0.54
HIST1H1AQ02539 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
HIST1H1AQ02539 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC11.7□□□□□ -0.54
HIST1H1AQ02539 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
HIST1H1AQ02539 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
HIST1H1AQ02539 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
HIST1H1AQ02539 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
HIST1H1AQ02539 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
HIST1H1AQ02539 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
HIST1H1AQ02539 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
HIST1H1AQ02539 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
HIST1H1AQ02539 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
HIST1H1AQ02539 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC11.7□□□□□ -0.54
HIST1H1AQ02539 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
HIST1H1AQ02539 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC11.7□□□□□ -0.54
HIST1H1AQ02539 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
HIST1H1AQ02539 HNRNPFP1-201ENST00000391730 1133 ntBASIC11.7□□□□□ -0.54
HIST1H1AQ02539 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC11.7□□□□□ -0.54
HIST1H1AQ02539 AC254562.1-201ENST00000417586 456 ntBASIC11.7□□□□□ -0.54
HIST1H1AQ02539 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC11.7□□□□□ -0.54
HIST1H1AQ02539 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC11.7□□□□□ -0.54
HIST1H1AQ02539 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC11.7□□□□□ -0.54
HIST1H1AQ02539 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC11.7□□□□□ -0.54
HIST1H1AQ02539 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC11.7□□□□□ -0.54
HIST1H1AQ02539 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC11.7□□□□□ -0.54
HIST1H1AQ02539 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC11.7□□□□□ -0.54
HIST1H1AQ02539 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC11.7□□□□□ -0.54
HIST1H1AQ02539 AL079307.3-201ENST00000556114 283 ntBASIC11.7□□□□□ -0.54
HIST1H1AQ02539 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC11.7□□□□□ -0.54
HIST1H1AQ02539 AL133215.2-201ENST00000609242 977 ntBASIC11.7□□□□□ -0.54
HIST1H1AQ02539 AL596442.2-201ENST00000610240 980 ntBASIC11.7□□□□□ -0.54
HIST1H1AQ02539 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
HIST1H1AQ02539 AP001059.3-201ENST00000619053 235 ntBASIC11.7□□□□□ -0.54
HIST1H1AQ02539 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC11.7□□□□□ -0.54
HIST1H1AQ02539 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC11.7□□□□□ -0.54
HIST1H1AQ02539 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC11.7□□□□□ -0.54
HIST1H1AQ02539 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC11.7□□□□□ -0.54
HIST1H1AQ02539 SLC35E2B-205ENST00000617444 6283 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
HIST1H1AQ02539 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
HIST1H1AQ02539 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
HIST1H1AQ02539 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
HIST1H1AQ02539 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
HIST1H1AQ02539 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
HIST1H1AQ02539 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC11.7□□□□□ -0.54
HIST1H1AQ02539 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
HIST1H1AQ02539 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
HIST1H1AQ02539 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
HIST1H1AQ02539 ALX4-201ENST00000329255 5750 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
HIST1H1AQ02539 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
HIST1H1AQ02539 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
HIST1H1AQ02539 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
HIST1H1AQ02539 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC11.7□□□□□ -0.54
HIST1H1AQ02539 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC11.7□□□□□ -0.54
HIST1H1AQ02539 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC11.7□□□□□ -0.54
HIST1H1AQ02539 CDK11B-203ENST00000341832 2998 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
HIST1H1AQ02539 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC11.69□□□□□ -0.54
HIST1H1AQ02539 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
HIST1H1AQ02539 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
HIST1H1AQ02539 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC11.69□□□□□ -0.54
HIST1H1AQ02539 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
HIST1H1AQ02539 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC11.69□□□□□ -0.54
HIST1H1AQ02539 DGCR9-201ENST00000609630 2415 ntBASIC11.69□□□□□ -0.54
HIST1H1AQ02539 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
HIST1H1AQ02539 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC11.69□□□□□ -0.54
HIST1H1AQ02539 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
HIST1H1AQ02539 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
HIST1H1AQ02539 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
HIST1H1AQ02539 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
HIST1H1AQ02539 PPFIA4-203ENST00000367240 6434 ntAPPRIS P5 TSL 5 BASIC11.69□□□□□ -0.54
HIST1H1AQ02539 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC11.69□□□□□ -0.54
HIST1H1AQ02539 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC11.69□□□□□ -0.54
HIST1H1AQ02539 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
HIST1H1AQ02539 GRAMD4P3-201ENST00000621665 1669 ntBASIC11.69□□□□□ -0.54
HIST1H1AQ02539 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
HIST1H1AQ02539 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
HIST1H1AQ02539 EPB41L1-202ENST00000338074 6266 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
HIST1H1AQ02539 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
HIST1H1AQ02539 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
HIST1H1AQ02539 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC11.69□□□□□ -0.54
HIST1H1AQ02539 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC11.69□□□□□ -0.54
HIST1H1AQ02539 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
HIST1H1AQ02539 AMT-224ENST00000635808 1610 ntTSL 5 BASIC11.69□□□□□ -0.54
HIST1H1AQ02539 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
HIST1H1AQ02539 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
HIST1H1AQ02539 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
HIST1H1AQ02539 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 67.3 ms