Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC15.22■□□□□ 0.03
AP1S1P61966 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC15.22■□□□□ 0.03
AP1S1P61966 FTLP10-202ENST00000505798 471 ntBASIC15.22■□□□□ 0.03
AP1S1P61966 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
AP1S1P61966 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC15.22■□□□□ 0.03
AP1S1P61966 AC133552.6-201ENST00000613406 534 ntBASIC15.22■□□□□ 0.03
AP1S1P61966 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC15.22■□□□□ 0.03
AP1S1P61966 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
AP1S1P61966 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
AP1S1P61966 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC15.22■□□□□ 0.03
AP1S1P61966 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
AP1S1P61966 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC15.22■□□□□ 0.03
AP1S1P61966 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
AP1S1P61966 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
AP1S1P61966 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC15.22■□□□□ 0.03
AP1S1P61966 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
AP1S1P61966 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
AP1S1P61966 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
AP1S1P61966 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
AP1S1P61966 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
AP1S1P61966 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
AP1S1P61966 BANP-201ENST00000286122 2368 ntTSL 5 BASIC15.21■□□□□ 0.03
AP1S1P61966 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC15.21■□□□□ 0.03
AP1S1P61966 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
AP1S1P61966 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
AP1S1P61966 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
AP1S1P61966 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
AP1S1P61966 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC15.21■□□□□ 0.03
AP1S1P61966 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
AP1S1P61966 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
AP1S1P61966 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC15.21■□□□□ 0.03
AP1S1P61966 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
AP1S1P61966 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
AP1S1P61966 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
AP1S1P61966 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC15.21■□□□□ 0.03
AP1S1P61966 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
AP1S1P61966 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
AP1S1P61966 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
AP1S1P61966 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
AP1S1P61966 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
AP1S1P61966 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
AP1S1P61966 SERF2-209ENST00000409646 559 ntTSL 4 BASIC15.21■□□□□ 0.03
AP1S1P61966 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC15.21■□□□□ 0.03
AP1S1P61966 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC15.21■□□□□ 0.03
AP1S1P61966 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
AP1S1P61966 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC15.21■□□□□ 0.03
AP1S1P61966 NOP2-220ENST00000545915 630 ntTSL 2 BASIC15.21■□□□□ 0.03
AP1S1P61966 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC15.21■□□□□ 0.03
AP1S1P61966 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
AP1S1P61966 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC15.21■□□□□ 0.03
AP1S1P61966 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC15.21■□□□□ 0.03
AP1S1P61966 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC15.21■□□□□ 0.03
AP1S1P61966 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
AP1S1P61966 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC15.21■□□□□ 0.03
AP1S1P61966 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC15.21■□□□□ 0.03
AP1S1P61966 MIR6775-201ENST00000617557 69 ntBASIC15.21■□□□□ 0.03
AP1S1P61966 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
AP1S1P61966 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
AP1S1P61966 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
AP1S1P61966 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
AP1S1P61966 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
AP1S1P61966 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
AP1S1P61966 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
AP1S1P61966 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
AP1S1P61966 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
AP1S1P61966 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
AP1S1P61966 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
AP1S1P61966 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
AP1S1P61966 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
AP1S1P61966 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC15.21■□□□□ 0.02
AP1S1P61966 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC15.21■□□□□ 0.02
AP1S1P61966 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC15.21■□□□□ 0.02
AP1S1P61966 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
AP1S1P61966 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
AP1S1P61966 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
AP1S1P61966 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
AP1S1P61966 MARS-233ENST00000628866 2583 ntTSL 5 BASIC15.21■□□□□ 0.02
AP1S1P61966 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC15.21■□□□□ 0.02
AP1S1P61966 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC15.2■□□□□ 0.02
AP1S1P61966 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
AP1S1P61966 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
AP1S1P61966 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC15.2■□□□□ 0.02
AP1S1P61966 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
AP1S1P61966 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
AP1S1P61966 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC15.2■□□□□ 0.02
AP1S1P61966 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
AP1S1P61966 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
AP1S1P61966 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
AP1S1P61966 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
AP1S1P61966 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
AP1S1P61966 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC15.2■□□□□ 0.02
AP1S1P61966 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
AP1S1P61966 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC15.2■□□□□ 0.02
AP1S1P61966 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC15.2■□□□□ 0.02
AP1S1P61966 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC15.2■□□□□ 0.02
AP1S1P61966 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
AP1S1P61966 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
AP1S1P61966 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
AP1S1P61966 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC15.2■□□□□ 0.02
AP1S1P61966 MIR658-201ENST00000385210 100 ntBASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms